Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20obtusa_20[genbank_20GCA_5F001264985.1_202015-08-11] 1,709 sequences; 7,842,882 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq1044 114 5e-20 seq1155 104 1e-16 seq765 89.7 2e-12 seq831 86.0 3e-11 >seq1044 Length=89267 Score = 114 bits (126), Expect = 5e-20 Identities = 330/500 (66%), Gaps = 17/500 (3%) Strand=Plus/Plus Query 448659 AGACGCGCTCCATGTCGCCCAATCGGAGCCCGCCGTGTCGCAACTTGCCCTCGGTGGGCT 448718 || |||||||||| ||||| | || || ||||||| ||| | ||||||||| |||| Sbjct 36840 AGTCGCGCTCCATCTCGCCAAGGCGCAGACCGCCGTCGCGCGAGCGGCCCTCGGTCGGCT 36899 Query 448719 GCCGCGTGAGGAGCGAGTACGGTCCCCTCTGCCGCGTGTGCATCTTCTCCGAGGCCAGTT 448778 | |||||||| | || | ||| || | | |||| |||||||| ||| | ||| | Sbjct 36900 GGCGCGTGAGCACCGCGCGCGGCCCGCGCGCACGCGCATGCATCTTGTCCATGACCATGT 36959 Query 448779 GCTTGAGGCTCTGGAAGAAGAAGGGCGCGTAGAACATG--CGGCACGGCATCATCTCGCC 448836 | ||||| ||||| || ||| || || || | | | || | | |||| |||||| Sbjct 36960 GTTTGAGCTTCTGGTAGTAGATCGGGCCGAAGTAGACGTACGCCTC--CATCGGCTCGCC 37017 Query 448837 CGTCTGGCCGTCCGTAAAGATCGTCTTGCCCTCGGGCTCGATCATGCCCCTCTCCTCCA- 448895 ||| |||| ||| | | | |||||| || | | | ||| |||| | | Sbjct 37018 GGTCGTGCCGCTCGTGAGGTACTCCTTGCC---GGCATAGTTGTAGCCGTTCTCGACGAG 37074 Query 448896 --TGTAGTCCATGAGCTCGGCCACGGAGAGGTCCGAAAAGGCCGTGCCGTCCTGCGGCAA 448953 || | ||| |||| || ||| | | |||||||||||||| |||| || Sbjct 37075 GATGCGGGACATATCCTCGACCTTGGACCCGCC---AAAGGCCGTGCCGTACTGCAGCGT 37131 Query 448954 GCCGCTCTCACAGCCCGTGA-TGGCCTGGAGGGC-CTCGAGCAACATGGCGTAGGTCATG 449011 || | |||| ||| | | ||| | | | ||||| || | || || |||||| Sbjct 37132 ACC--TTGCACAACCCCCGCCTTGCCGGCAAGCAGCTCGATCATCTTGCCGACGGTCATA 37189 Query 449012 CGCGACGGGTAGGCATGCGGGTTCATGATGATGTCGGGCGTCTCGCCGGCCGCGTTGAAG 449071 ||||||||| || |||| ||||||||||| || ||||| ||| || |||| Sbjct 37190 CGCGACGGGAAGCCATGGGGGTTCATGATAATATCGGGGCAGATGCCCTGGTCGGTGAAC 37249 Query 449072 GGCATGTCCTCGGGGTTGACCACCAGGCCGTTGACGCCCTTCTGGCCGTGGCGGCTGCAG 449131 ||||| ||||| | | || | ||| || |||||||||||| ||||| || || Sbjct 37250 GGCATATCCTCCTGCTGCACGATCAGACCACAGACGCCCTTCTGCCCGTGTCGCGACGAG 37309 Query 449132 AACTTGTCCCCCTGCTCGGG 449151 |||||||| || | ||||| Sbjct 37310 AACTTGTCGCCAAGTTCGGG 37329 >seq1155 Length=87676 Score = 104 bits (114), Expect = 1e-16 Identities = 104/135 (77%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 349082 ATCTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGG 349141 |||||||| || | |||| || || || ||||||||| || ||| ||||| ||||| Sbjct 13545 ATCTCCTTCAGGCGCGGCACACCGAGCGTGACGTTCTTGCTCGAGACACCGGCGTAGTGG 13604 Query 349142 AAGGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCT 349201 ||||| | ||| |||| |||||| ||||||||||||| ||| ||||||| |||| Sbjct 13605 AAGGTGTTGAGCGTCATCTGCGTCGCCGGCTCGCCGATGCTCTGCGCCGCGAGCGTGCCG 13664 Query 349202 ACCATCTCGCCGGGC 349216 ||||||||||||| Sbjct 13665 CACATCTCGCCGGGC 13679 >seq765 Length=14031 Score = 89.7 bits (98), Expect = 2e-12 Identities = 96/126 (76%), Gaps = 6/126 (5%) Strand=Plus/Plus Query 349097 GGCATGCCCAGGGTCACGTTCTTGGCCGCGACG---CCGGCAAAGTGGAAGGTCTGGAGG 349153 || ||||| || || |||||| |||||| || || ||||||||||| || | ||| Sbjct 1432 GGGATGCCGAGCGTGACGTTC---GCCGCGCCGTGGCCCGCAAAGTGGAACGTGTTGAGC 1488 Query 349154 GTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCG 349213 |||| |||||| |||||||||||||| ||| | ||||| | ||| || |||||||| Sbjct 1489 GTCATCTGCGTCGAGGGCTCGCCGATGCCCTGCGCGGCGAGCAGGCCGACGTTCTCGCCG 1548 Query 349214 GGCGCG 349219 ||| || Sbjct 1549 GGCTCG 1554 >seq831 Length=9379 Score = 86.0 bits (94), Expect = 3e-11 Identities = 89/114 (78%), Gaps = 2/114 (2%) Strand=Plus/Plus Query 120159 AGGGCATGCACTTTCTGCACTCGTCGGGCATCGTGCACCGGGACATGAA-GTCGCTCAAC 120217 ||||| | | ||||||||||||| || ||||||||||||||||| || | ||| |||| Sbjct 464 AGGGCCTCCTCTTTCTGCACTCGCAGGCGATCGTGCACCGGGACATCAAGGGCGC-CAAC 522 Query 120218 CTTCTCCTGGACAACAAGTGGAACGTCAAGGTCTCTGACTTTGGCCTCACCAAG 120271 | ||| ||||||||||| | |||||| || ||||||||| ||| |||| Sbjct 523 ATCCTCGTGGACAACAAGGGCGGTGTCAAGATCAGCGACTTTGGCATCAGCAAG 576 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084692437996782