Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq9 376 5e-102 seq30 315 1e-83 >seq9 Length=321 Score = 376 bits (416), Expect = 5e-102 Identities = 239/257 (93%), Gaps = 2/257 (1%) Strand=Plus/Plus Query 63 GAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCT-TTGCTCGAATA 121 || ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||| Sbjct 1 GAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCGTATTGCTCGAATA 60 Query 122 CATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGC 181 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 61 TATTAGCATGGAATAATAGAATAGGACGTTTGGTTCTATTTTGTTGGTTTCTAGGACCAT 120 Query 182 CGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCT 241 |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||| Sbjct 121 CGTAATGATTAATAGGGACGGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCT 180 Query 242 TGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAG 301 |||||||||||||||||||||||||||||||| || ||||||| |||||||||||||| Sbjct 181 TGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGACGTTTTCATTAATCA- 239 Query 302 TGAACGAAAGTTAGGGG 318 |||||||||||||||| Sbjct 240 AGAACGAAAGTTAGGGG 256 >seq30 Length=7530 Score = 315 bits (348), Expect = 1e-83 Identities = 226/258 (88%), Gaps = 2/258 (1%) Strand=Plus/Minus Query 61 GGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAA 119 |||| ||||| | ||||||||||||||||||||||||||||||||||| | || ||| Sbjct 5297 GGGAACCAGGTCCTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCTTCACGCCAGAA 5238 Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC 179 || ||||||||||||||||| ||||||||||||||||||||||||||||||| | | | | Sbjct 5237 TATATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTTTGGAATC 5178 Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239 |||||||||||||||||||||||||||||| | |||| ||| || |||||||||||| Sbjct 5177 GCCGTAATGATTAATAGGGATAGTCGGGGGCATTAGTACTCACATGCTAGAGGTGAAATT 5118 Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299 ||||||||| |||||||||||| |||||||||| || ||||||||||||||||||||| Sbjct 5117 CTTGGATTTTGTGAAGACTAACTTCTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATC 5058 Query 300 AGTGAACGAAAGTTAGGG 317 | ||||||| ||||||| Sbjct 5057 A-AGAACGAAGGTTAGGG 5041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199441728