Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq30 533 6e-149 seq21 163 1e-37 >seq30 Length=7530 Score = 533 bits (590), Expect = 6e-149 Identities = 532/680 (78%), Gaps = 51/680 (8%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||||||||||||||| |||||||| ||||||| |||| | | | ||||||||||||| Sbjct 3451 GAGTCGAGTTGTTTGGGATTGCAGCTCAAAATGGGTGGTAGACTCCATCTAAAGCTAAAT 3392 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || || |||||||||||||| ||||||| |||| ||||||||||||||||||||||| Sbjct 3391 ATCGGGGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGCACTTTGGAA 3332 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACTTGCCCG 219 |||||||||||| | |||||||||||| |||||||||||||||| | ||| | ||| | Sbjct 3331 AGAGAGTTAAAA-GTACGTGAAATTGTCGAAAGGGAAGCGCTTGAAGTCAGCCATGCT-G 3274 Query 220 CAGTTG---CTCAACCGGCCCCTCGGCCGGTGCACTCTTCTGCGGT--CAGGCCAGCATC 274 | ||| |||| || | | | |||| | | ||| |||| || |||||||| Sbjct 3273 C--TTGAGACTCAGCCTTGCTTTTGCTTGGTGTATT--TCT-CGGTAGCAAGCCAGCATT 3219 Query 275 AGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCC 334 | ||| | |||||| || || | |||||||| ||| || ||||||||| | Sbjct 3218 GGTTCGAGTCGTCGGAGAAGGGTATGAGAAATGTGGCATCCTC--GGATGTGTTATAGAC 3161 Query 335 ---------------CG----GGGT---GGAATGCGGCCCGCCTGGACTGA--GGTCCGC 370 || || | |||| || | |||| ||| |||| | Sbjct 3160 TTGTACTGGATACGACGATTTGGATCAAGGAACGCAGTGTGCCT---CTGGCGGGTCTTC 3104 Query 371 G--CTCCGGC-----TAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACG 423 | | || | ||||||||||||||||||| | |||||||||||||||| |||||| Sbjct 3103 GGACACCTTCACACTTAGGATGCTGGCGTAATGGCTTTAAGCGGCCCGTCTTGAAACACG 3044 Query 424 GACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAA 483 |||||||||||||||||| | ||||||| |||||||| ||||||| || ||||||||||| Sbjct 3043 GACCAAGGAGTCTAACATATGTGCGAGTTTTTGGGTGGCAAACCCATGAGCGTAATGAAA 2984 Query 484 GTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATG 543 ||||| | |||||||| || || | ||||||||||||| |||||| | | ||||| Sbjct 2983 GTGAATGCAGGTGGGATCCTCTG---GAGCACCATCGACCGGCCCTGATCTTCTGGGATG 2927 Query 544 GATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 603 | | |||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 2926 GGTCCGAGTAAGAGCATGTATGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGG 2867 Query 604 TGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 2866 CGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTC 2807 Query 664 AAATTTGGGTATAGGGGCGA 683 |||||||||||||||||||| Sbjct 2806 AAATTTGGGTATAGGGGCGA 2787 >seq21 Length=473 Score = 163 bits (180), Expect = 1e-37 Identities = 108/120 (90%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||| ||||||| |||||||||||||||||||||||||||||| |||| ||||||| Sbjct 354 TGTAAAGTGCCTTCGAAGAGTCGAGTTGTTTGGGAATGCAGCTCTAAGTGGGTGGTAAAT 413 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 | | ||||||||||||||||||| |||||||||||||| ||||||| |||||| |||||| Sbjct 414 TCCATCTAAAGCTAAATATTGGCGAGAGACCGATAGCGAACAAGTACAGTGATGGAAAGA 473 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079998691550