Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq30 416 5e-114 seq48 187 4e-45 >seq30 Length=7530 Score = 416 bits (460), Expect = 5e-114 Identities = 247/258 (96%), Gaps = 0/258 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4537 TACTCGTTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 4596 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 |||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| Sbjct 4597 ACCTGTTATTGCCTCAAACTTCCATTGGCTAAACGCCAATAGTCCCTCTAAGAAGCCAGC 4656 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | ||||| ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 4657 AGCTAACCAAAGTCGGCTGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 4716 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4717 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 4776 Query 241 AAGAGCTATCAATCTGTC 258 |||||||||||||||||| Sbjct 4777 AAGAGCTATCAATCTGTC 4794 >seq48 Length=655 Score = 187 bits (206), Expect = 4e-45 Identities = 199/273 (73%), Gaps = 19/273 (7%) Strand=Plus/Minus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGC-------- 53 ||||| |||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 321 ACTCGCTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACGTCTAAGGGCNNNNNNNN 262 Query 54 -----ATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTC 108 | |||| ||| || |||||||||| Sbjct 261 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGGCTTGAAACCGATAGTCCCTC 202 Query 109 TAAGAA---GCCAGCCACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGT 165 |||||| | | ||| ||| || | | |||||||| ||||||||||||||| Sbjct 201 TAAGAAGTGGATAACCAGCAA--ATGCTAG-CACCACTATTTAGTAGGTTAAGGTCTCGT 145 Query 166 TCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCA 225 ||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 144 TCGTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCA 85 Query 226 CCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||| | ||||||||||||||| |||||||||| Sbjct 84 CCCACAAAATCAAGAAAGAGCTCTCAATCTGTC 52 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796799529141