Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001264975.1_202015-08- 11] 61 sequences; 8,158,346 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq34 78.8 1e-12 >seq34 Length=5376 Score = 78.8 bits (86), Expect = 1e-12 Identities = 187/275 (68%), Gaps = 12/275 (4%) Strand=Plus/Plus Query 11 TTCGGGCTT-AGATGCCTTCAGCTCTTATCCCTTCCAAACT-TAGCTTCCCAGCTATGC- 67 |||| |||| ||||||||||||| ||| | | ||| || | ||||| ||| || ||| Sbjct 4881 TTCGCGCTTGAGATGCCTTCAGCACTTCT-CTTTCAGAATTGTAGCTACCCTGCGGTGCC 4939 Query 68 --ACTTGGCAGT---ACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACT 122 | || || | ||||| | | ||||| | || || | |||||| ||||||| Sbjct 4940 ATAATTTACATTACAACAACAGATACACCATGGAATTCTCTCTAATGGTCCTTTCGTACT 4999 Query 123 AAGGACAGCTCCTCTCAAATTTCCTACGCCC--ACGACGGATAGGGACCGAACTGTCTCG 180 || | || | |||| ||| | ||| ||| |||||| | |||| ||| Sbjct 5000 AACTAGAGGTTCTCTATTTATTCTTTTTCCCTTCCGA-GGATAGAATCTATACTGACTCA 5058 Query 181 CGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGAC 240 || ||| | |||||| ||| ||| |||||||| | ||||||||| ||||||| | Sbjct 5059 CGTCGTATTAAACCCAACTCACGTTCCTCTTTACTCAGCGAACAGCTGAACCCTTCCAAG 5118 Query 241 CTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | ||| || | ||||||||| ||| |||||||| Sbjct 5119 CGACTACACCTGGAGGATGAGAAGAGTCGACATCG 5153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780799538596