Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq34 156 7e-36 seq26 147 4e-33 >seq34 Length=3065 Score = 156 bits (172), Expect = 7e-36 Identities = 156/196 (80%), Gaps = 6/196 (3%) Strand=Plus/Plus Query 87 ATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAGAACGGGGTGATTCTCTCCTGCACAT 146 |||||||||||||||||||||||||||| |||| ||||| || ||| | || |||| | Sbjct 3 ATGGCTGAACGCCTCTAAGTCAGAATCCGTGCCGGAACGCGGCGATGTTGCCCCGCACGT 62 Query 147 CGTAGTCGGATACGAATAGGCTTC--GGCCCCGAACCTTAGCAGGCCGGCAACGGGCGTC 204 |||||| |||||||||||||| || |||| | |||| ||||||| ||| || ||| | Sbjct 63 CGTAGTTGGATACGAATAGGCCTCCGGGCCATGCACCTCAGCAGGCTGGCGAC-GGCTCC 121 Query 205 CCGCG-GAAG-CGCGGGGCGCTCAGCTGGCGGATTGCAATTTCACCATGCGCAGGGATAA 262 | | |||| | | ||| ||| ||||||| |||||||| ||||| |||| ||||| | Sbjct 122 TAGGGAGAAGCCCCTGGGAGCT-GGCTGGCGAATTGCAATGTCACCTCGCGCGGGGATGA 180 Query 263 ATCCTTTGCAGACGAC 278 ||||| |||||||||| Sbjct 181 ATCCTCTGCAGACGAC 196 >seq26 Length=8422 Score = 147 bits (162), Expect = 4e-33 Identities = 108/123 (88%), Gaps = 2/123 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| || |||||| |||||||| ||||| ||||| |||| |||| | Sbjct 890 GTACGAGAGGAACCGTTGA-TTCAGA-TAATTGGTATTTGCACCTGTCCGACCGGGCAAT 833 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||| | Sbjct 832 GGCGCGAAGCTACCATCTGCTGGATAATGGCTGAACGCCTCTAAGCCAGAATCCGTGCTA 773 Query 121 GAA 123 ||| Sbjct 772 GAA 770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819199277824