Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20pachydermatis_20[genbank_20GCA_5F001278385.1_202015-09- 02] 91 sequences; 8,150,648 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq11 315 6e-81 >seq11 Length=163833 Score = 315 bits (348), Expect = 6e-81 Identities = 608/888 (68%), Gaps = 18/888 (2%) Strand=Plus/Plus Query 61051 CGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTACAAAAAGGCG 61110 || || || || ||||||| ||| || | || || ||| |||||||| ||||| Sbjct 11987 CGCCGCTTTGTGCTGTTCCCGATCCGCTACCACGAGATCTGGGCGATGTACAAGAAGGCT 12046 Query 61111 GAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAATGACTGGGAG 61170 || || || |||||||| | |||||||||||| |||| || ||| || | |||||||| Sbjct 12047 GAGGCCTCGTTCTGGACCGCTGAGGAGGTCGATCTGTCGAAGGACTTGCACGACTGGGAC 12106 Query 61171 ---CGTTT-ATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGC 61226 || | | ||| | || | || || | | || | |||||||| ||||| Sbjct 12107 AACCGCATGAACGA-CAACGAGCGTCACTTTGTGAGTACCGTCCTTGCGTTCTTCGCCGC 12165 Query 61227 TTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTC 61286 ||||||||||| || || ||||| | ||||| |||||| | || ||||| ||| | Sbjct 12166 GTCGGACGGTATTGTGAACGAGAACCTGTTGGAGCGTTTCAGCAACGAAGTGCAGGTGGC 12225 Query 61287 GGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGGAGATGTA 61346 |||||| || || |||||||| ||||||||| |||||||| | |||||||||| || Sbjct 12226 GGAGGCTCGCTGCTTCTACGGTTTCCAGATTATGATGGAGAACATTCACTCGGAGACCTA 12285 Query 61347 CAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGTTCAATGC 61406 | | |||||||| ||||||||| | || |||| | || || ||||||| || Sbjct 12286 CTCGCTGCTCATCGACACGTACATCCGCGACACGGCGCAGCGCGAGTACCTGTTCAACGC 12345 Query 61407 CATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGATCACCAG 61466 |||||||| || || | ||||||| ||| || || |||||| | ||||| | | Sbjct 12346 TATCGAGACCATTCCCGTTGTGAAGCAGAAGGCCGAGTGGGCCCTTCGCTGGATTGC--G 12403 Query 61467 TACAA-CG-GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGGTGTATTT 61524 |||| || || | || || || | |||| ||||| | || ||||| | || Sbjct 12404 GACAAGCGTGCCTCGTTCTCGGAGCGCCTTGTGGCGTTTGCCGCCGTGGAGGGCATCTTC 12463 Query 61525 TTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCCCGGTCTG 61584 ||| || |||||||| | ||||| ||| ||||||| ||||| || ||||| |||||| Sbjct 12464 TTCTCGGGCTCGTTTGCGTCGATCTTCTGGCTGAAGAAGCGTGGTCTCATGCCGGGTCTG 12523 Query 61585 ACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGCTGTTTTG 61644 | ||| || ||| | || | || |||||||| |||| || ||||| ||| Sbjct 12524 TCGTTCTCGAACGAGCTTATTACCCGTGACGAGGGTCTGCACACCGACTTTGCGTGCTTG 12583 Query 61645 CTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGATTGTTCGT 61704 || |||| | | ||| ||| || || || || || || Sbjct 12584 CTGTTCA---GTCACCTGAAGAAGCGCTCGCACCCTGACACGGTCAACCGCATCATTACC 12640 Query 61705 GAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCCCGTCTCACTCATCGGC 61764 ||||| || | ||||| |||| ||| |||| || ||| |||| || || || |||||| Sbjct 12641 GAGGCTGTCTCGATCGAGAAGGACTTTTTGACGGAGGCTCTGCCTGTGTCGCTTATCGGC 12700 Query 61765 ATGAATTGTGGACTAATGTCGCAGTATATTGAATTTGTTGCCGACCGTCTGTTGGTCGAT 61824 |||||| | | || |||| ||||| ||||| ||||| |||||||||||| |||||| | Sbjct 12701 ATGAATGCTCGTCTCATGTGCCAGTACATTGAGTTTGTGGCCGACCGTCTGCTGGTCGCT 12760 Query 61825 TTGGGTA---TGAAGCGGATCTATAATACGAAAAACCCATTTGATTTCATGGACATGATT 61881 | || | ||||| ||| | ||| || |||||||| || ||||| | || Sbjct 12761 CTCGGCAACCCGAAGC---ACTACCACTCGACGAATCCATTTGACTTTATGGAGAACATC 12817 Query 61882 TCGCTGGATGGCAAGACGAATTTTTTCGAGAAACGTGTAGGCGACTAT 61929 |||||| | |||||| |||| ||||||||| ||||| | ||||||| Sbjct 12818 TCGCTGCAGGGCAAGTCGAACTTTTTCGAGCGTCGTGTGGCCGACTAT 12865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567559072240