Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Malassezia_20sympodialis_20[genbank_20GCA_5F900149155.1_202017-01- 09] 8 sequences; 7,757,162 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq5 812 0.0 >seq5 Length=679138 Score = 812 bits (900), Expect = 0.0 Identities = 505/538 (94%), Gaps = 5/538 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 622000 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATT 621941 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 621940 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 621881 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||| ||||||||||| |||| || ||| |||| ||| |||||||||||||||||| Sbjct 621880 AGCCCGTAAAGGACCTTAATGCCAAAACGTGGGCGGTTAAGCCCAGTTCCGCTTCATTGA 621821 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 |||||||||| ||||||| ||||||||||||||||| |||||| | ||||||||||| Sbjct 621820 ATAAGTAAAAAGACGATAAAGGTAGTGGTATTTCACTGGCGCCGGA---GCTCCCACTTA 621764 Query 247 TTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 ||||||||| ||| | ||| ||||||| ||| |||||||||||||||||||||||||| Sbjct 621763 TTCTACACC-CTCTATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 621705 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 621704 CTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 621645 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 621644 AGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 621585 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 621584 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 621525 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 621524 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCACTTTCTG 621467 Score = 708 bits (784), Expect = 0.0 Identities = 491/538 (91%), Gaps = 19/538 (4%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 613967 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGTCCCC-TTAGGACACCTGCGTTATT 613909 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 613908 GTTTAACAGATGTGCCGCCC-AGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGATC 613850 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||| ||||||||||| |||| || ||| || | ||| |||||||||||||||||| Sbjct 613849 AGCCCGTAAAGGACCTTAATGCCAAAACGTGGGCGTT-AAGCCCAGTTCCGCTTCATTGA 613791 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||| | |||||| ||||||||||||||||| |||||| | ||||||||||| Sbjct 613790 ATAAGTAAAAGA-CGATAAAGGTAGTGGTATTTCACTGGCGCCGGA---GCTCCCACTTA 613735 Query 247 TTCTACACCTCTCAA-GTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305 ||||||||| ||| | ||| ||||||| ||| ||||||||||||||||||||| |||| Sbjct 613734 TTCTACACC-CTCTATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAACAGG-TCTT 613677 Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365 ||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||| Sbjct 613676 CTTTCCC-GCTGATTCTGCCAAGCC-GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 613619 Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425 ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||| Sbjct 613618 AGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGACGA-GCAT 613560 Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485 |||||||||| || ||||||||||||||||||||||||||||||||| |||||| ||| Sbjct 613559 TTGGCTACCTAAA---AGTCATAGTTACTCCCGCCGTTTACCCGCGCTT-GTTGAA-TTC 613505 Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 613504 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA-CACTTTCTG 613448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199869184