Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Meira_20nashicola_20[genbank_20GCA_5F001600355.1_202016-03-01] 58 sequences; 18,015,688 total letters Query= NC_023503.1 Length=48800 Score E Sequences producing significant alignments: (Bits) Value seq3 86.0 2e-12 >seq3 Length=3165745 Score = 86.0 bits (94), Expect = 2e-12 Identities = 332/514 (65%), Gaps = 31/514 (6%) Strand=Plus/Minus Query 1693 GCACGTGAAGTCCTTGACTCACGCGGTAACCCAACACTTGAAGTAGAAGTTTACACTGAA 1752 || ||| || || ||||||| || ||||||||||| ||||||| || ||| || | | Sbjct 924151 GCTCGTCAAATCTTTGACTCTCGTGGTAACCCAACCGTTGAAGTTGACCTTTGGACCGCA 924092 Query 1753 TCTGGTGCATTCGGTCGCGGTATGGTTCCTTCAGGAGCATCAACTGGTGAACACGAAGCA 1812 ||| ||| || ||| ||||| || || || ||||||| ||||||||| Sbjct 924091 AAAGGTCTTTTCCGTGCTGGT---GTTCCAAGTGGTGCTTCCACTGGTGTTCACGAAGCA 924035 Query 1813 GTAGAACTTCGTGATGGTGACAAAGCTCGTTACGGTGGTCTTGGTACTCAAAAAGCAGTT 1872 ||| | ||||| |||||||||| ||| || ||| | |||||||||| Sbjct 924034 TGTGAATTGCGTGACGGTGACAAAGGAGCATACATGGGCAAAGGTGTTTTAAAAGCAGTT 923975 Query 1873 GATAACGTAAACAACGTTAT------TGC--TGAGCACAT-CATCGGATTCGACGTACGT 1923 ||||| || ||||||||||| ||| ||| | || || || || | || | Sbjct 923974 GATAATGTTAACAACGTTATCTGGCCTGCATTGA-AAGATGCA--GGTTTGAAAGTTACT 923918 Query 1924 GATCAACAAGGTATTGACCGCGCAATGATCGCTCTTGACGGTACTCCAAACAAAGGTAAA 1983 || ||| || || || | ||||| | |||||||| |||||||| ||| Sbjct 923917 GAACAAAAACAAATCGATGACTTTTTGATCAAATTGGACGGTACACCAAACAAGACCAAA 923858 Query 1984 CTTGGTGCCAACGCTATTCTTGGTGTGTCTATCGCTGTAGCACGCGCAGCTGCTGACTAC 2043 |||||||| || || || | ||||| || ||||| || || || | |||||| | Sbjct 923857 CTTGGTGCAAATGCAATCTTGGGTGTTTCAATCGCAGTTGCCAAAGCTGGTGCTGAAGAA 923798 Query 2044 CTTGAAGTTCCACTTTACAGCTACCTTGGCGGAT--TCAACACTAAAG--TTCTT----- 2094 | ||| | ||||||| || ||| || | || | ||| | ||| Sbjct 923797 AACGGTGTTGCTCTTTACAAGCACATTGCCGCTTTGTCTGGTGTTAAGGCTCCTTACATC 923738 Query 2095 ---CCAACTCCAATGATGAACATCATCAACGGTGGTTCTCACTCAGACGCTCCAA--TCG 2149 || ||||| |||||| | |||||||||||||| ||| ||| | ||| | | Sbjct 923737 TTGCCTGCTCCAGCCATGAACGTTATCAACGGTGGTTCCCACGCAG--GTAACAAGTTGG 923680 Query 2150 CTTTCCAAGAATTTATGATTGTACCTGCTGGTGC 2183 || |||||||| ||||| || || ||||||| Sbjct 923679 CTCCTCAAGAATTCATGATCGTGCCAACTGGTGC 923646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 156038292528552