Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq8576 127 3e-27 >seq8576 Length=8562 Score = 127 bits (140), Expect = 3e-27 Identities = 145/194 (75%), Gaps = 7/194 (4%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||||||| || | |||||||| | |||||| || |||| | ||| ||| | Sbjct 3852 CATCAGTAGGGTAAACCTGATCTGTCTCACACCAGTCTAAGCCTAGCTTATGTTGCCTTT 3793 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 ||| | || ||||| |||| |||||| |||||| | || |||| | ||| | Sbjct 3792 CAGTAGATGGACAATTCAACACTTACCAAATTCTCC------ATCTTAGGTA-TGCCAAT 3740 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 ||| | |||||||||||| | | |||||| || |||||||||||| || |||||| Sbjct 3739 ATCAACGGATCAAAAAGCCATGATCCTATGATTGCCTGGCTGCCACAAACCGTGTATCCC 3680 Query 212 TGTGGTAACTTTTC 225 ||||||| |||||| Sbjct 3679 TGTGGTACCTTTTC 3666 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854278478688