Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq5368 78.8 1e-12 >seq5368 Length=5578 Score = 78.8 bits (86), Expect = 1e-12 Identities = 82/108 (76%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 168 CCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCC 227 ||| |||| ||| || ||| ||||||||||||| ||| | ||||| | | ||||||| | Sbjct 4782 CCGTACTGACTCACGTCGTACTGAACCCAGCTCACGTAGCACTTTACTAGACGAACAGTC 4723 Query 228 CAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 ||||||| | || ||||| | |||||| | |||||||||||| Sbjct 4722 TAACCCTTACAAGCTTCTTCACCTGTAGGATGTGCTGAGCCGACATCG 4675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780692417228