Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20abietis- canadensis_20[genbank_20GCA_5F002157025.1_202017-05-22] 14,223 sequences; 74,050,440 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq12786 340 3e-91 >seq12786 Length=14507 Score = 340 bits (376), Expect = 3e-91 Identities = 261/307 (85%), Gaps = 2/307 (1%) Strand=Plus/Minus Query 23 CGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGG 82 ||||||||| |||||||||||| || ||| ||| || || ||||||||||| Sbjct 14447 CGAGACCTTCTCCTGCTAAATAGTGTGGTTGGCTACGGCTGGCTAACG-CTTCTTAGAGG 14389 Query 83 GACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGA 141 |||||| | || |||||||||| ||||||||||||||||||||||||||||||| Sbjct 14388 GACTATTAATATTTAGTTGATGGAAGTTGGAGGCAATAACAGGTCTGTGATGCCCTTAGA 14329 Query 142 TGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGA 201 |||||||||||||||||||||||||||||| ||||| ||||| | ||||| ||| | Sbjct 14328 TGTTCTGGGCCGCACGCGCGCTACACTGACCAAGCCAGCGAGTATAAAACCTTATCCGAA 14269 Query 202 AGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCT 261 ||| ||||||||||||| ||||| |||||| ||||||||||||||||||||||||||| Sbjct 14268 AGGATTGGGTAATCTTGTGAAACTTGGTCGTGATGGGGATAGAGCATTGCAATTATTGCT 14209 Query 262 CTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCC 321 |||||||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| Sbjct 14208 CTTCAACGAGGAATACCTAGTAAGCGTATGTCATCAGCATGCGTTGATTACGTCCCTGCC 14149 Query 322 CTTTGTA 328 ||||||| Sbjct 14148 CTTTGTA 14142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947065279744