Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq18755 183 6e-44 >seq18755 Length=6561 Score = 183 bits (202), Expect = 6e-44 Identities = 240/328 (73%), Gaps = 11/328 (3%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGC---CGAGTGAT 67 || || |||||| ||| |||||| ||| | |||||||||| |||||||| || | ||| Sbjct 5723 AGCGGAGTGAAAAAGAACCTGAAACCGTGTGCCTACAAGCAGTCGGAGCATCCGTGAGAT 5664 Query 68 TCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTA-GTCGTCACCAGCGAGGTT 126 |||||||||||||||||| | ||||| || ||||| | | || || ||| ||||| Sbjct 5663 ---GTGACGGCGTGCCTTTTGTAGAATGAACCGGCGAGTGATGGCGGCA--AGCAAGGTT 5609 Query 127 AAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTG 186 |||| | ||| | |||||||| ||||||||| || || |||||| |||| || Sbjct 5608 AAGGCAGGAAAGCCGG--AGCCGAAGCGAAAGCGAGTCTGAATAGGGCGTTAAGTTTGTC 5551 Query 187 GCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTG 246 | | ||| ||||||| ||||||||||| | |||| |||||| |||||| | Sbjct 5550 GTCATCGACCCGAAACCGGGTGATCTACCCCTGGCCAGGGTGAAGTGCGGGTAACACCGC 5491 Query 247 ATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAA 306 ||||||| ||||||| |||||||||| |||||| | ||||||||| ||| Sbjct 5490 ATGGAGGCCCGAACCCACCGGCGTTGAAAAGCCGGGGGATGAGCTGGGGGTAGGGGAGAA 5431 Query 307 AGGCCAATCAAACTGGGAAATAGCTCGT 334 | |||||| |||| ||| |||||| || Sbjct 5430 ATTCCAATCGAACTCGGAGATAGCTGGT 5403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972515699200