Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq18755 336 6e-90 >seq18755 Length=6561 Score = 336 bits (372), Expect = 6e-90 Identities = 279/341 (82%), Gaps = 0/341 (0%) Strand=Plus/Minus Query 15 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCG 74 |||| |||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 799 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTGTCCG 740 Query 75 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGG 134 |||| ||||||||||||||||||| ||||||| |||| | || |||||| || ||| Sbjct 739 GAATCACTGGGCGTAAAGCGTGCGTAGGCGGTCTGATAAGTCTGGAGTGAAAGTCCAGGG 680 Query 135 CTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAAT 194 || |||| || | ||| || | |||| |||| |||| ||||| | ||||| Sbjct 679 CTCAACCCTGGGACTGCTTTGGAAACTGTGAGACTTGAGTACTGGAGAGGCAAGGGGAAT 620 Query 195 TCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCC 254 |||||||||||| |||||||||||||||||||||||||| |||| |||||||||| | Sbjct 619 TCCACGTGTAGCGGTGAAATGCGTAGATATGTGGAGGAATACCAGTGGCGAAGGCGCCTT 560 Query 255 CCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 314 |||| ||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct 559 GCTGGACAGTGACTGACGCTGAGGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 500 Query 315 TGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGG 355 |||||||||||||| |||||||| |||| |||||||| Sbjct 499 TGGTAGTCCACGCCGTAAACGATGAGTGCTAGGTGTTGGGG 459 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289223114400