Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq18755 95.1 1e-17 >seq18755 Length=6561 Score = 95.1 bits (104), Expect = 1e-17 Identities = 130/176 (74%), Gaps = 7/176 (4%) Strand=Plus/Minus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAA-TCACGGTT 80 || |||| |||||| || | | || || | || ||||||| | | ||| || || || Sbjct 4613 CGTAAACCGACACAGGTGGGTGCGTGGAGAACACGAAGGCGCGCGGGAGAACTCTCG-TT 4555 Query 81 AAGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGG 140 |||||||| |||||| || ||| |||||||||||| ||||| | || | |||| | Sbjct 4554 AAGGAACTCGGCAAAATGGCCCCGTAACTTCGGGA-GAAGGGGCGCT--CTGGAAACAG- 4499 Query 141 AGGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | ||||| ||| ||| ||| || |||||||| |||||||||||| || ||| || Sbjct 4498 -AGCCGCAGTGAAAAGGCCCAAGCGACTGTTTATCAAAAACACAGGTCTCTGCAAA 4444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531049608150