Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq18755 426 5e-117 >seq18755 Length=6561 Score = 426 bits (472), Expect = 5e-117 Identities = 344/410 (84%), Gaps = 7/410 (2%) Strand=Plus/Minus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||| |||||||||||||||||||||||| ||||||||||| ||||||||| Sbjct 407 TACGGTCGCAAGACTGAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCAGTGGAGCAT 348 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACAT-CCTCTGACCCCT 119 |||||||||||||||||||||||||||||||||||| |||||||| || |||||| | Sbjct 347 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAGGGCTTGACATCCCCCTGACCGGT 288 Query 120 CTAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCA 179 |||||| | || |||||||||| | | |||||||||| |||||||||||||||| Sbjct 287 GCAGAGATGTACCTT--CCCTTCGGGGCA-GGGGTGACAGGTGGTGCATGGTTGTCGTCA 231 Query 180 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTG 239 ||||||||||||||||||||||||||||||||||||||||||||||||| | || ||| Sbjct 230 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGACCTGTGTTA 171 Query 240 CCA--TCATTAAGTTGGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGG 297 ||| | | ||| ||| |||| || |||||||||| | || |||||||||||||| Sbjct 170 CCAGCGCGTAAAGGCGGGGACTCACAGGTGACTGCCGGCG-TAAGTCGGAGGAAGGTGGG 112 Query 298 GACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAA 357 || |||||||||||||||||||| ||||| |||||||||||||||||||||||| | Sbjct 111 GATGACGTCAAATCATCATGCCCTTTATGTCCTGGGCTACACACGTGCTACAATGGGCGG 52 Query 358 TACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTC 407 ||||| ||| ||||| |||| ||||| ||| || |||| |||| |||| Sbjct 51 TACAACGGGAAGCGAGACCGTGAGGTGGAGCGAAACCCAAAAAGCCGTTC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503560456000