Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq18755 279 1e-72 >seq18755 Length=6561 Score = 279 bits (308), Expect = 1e-72 Identities = 199/229 (87%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 111 GGGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGC 170 ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| Sbjct 4022 GGGACAGTGTCAGGTGGGCAGTTTGACTGGGGCGGTCGCCTCCTAAAGAGTAACGGAGGC 3963 Query 171 GCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTG 230 |||||||| | |||||||| ||||||||| | ||| | |||| ||||||| ||||| | Sbjct 3962 GCCCAAAGGTTCCCTCAGCGCGGATGGAAATCGCGCGAAGAGTGTAAAGGCACAAGGGAG 3903 Query 231 TTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGT 290 |||||||||| || || ||| ||||||||||||||||||||||| ||| |||||||| Sbjct 3902 CTTGACTGCGAGACGGACAGGTCGAGCAGGGACGAAAGTCGGGCTTAGTGACCCGGCGGT 3843 Query 291 GCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | || ||||| ||||||||||| ||||||||||||||||| ||||||| Sbjct 3842 ACCGAGTGGAAGGGCCGTCGCTCAACGGATAAAAGCTACCCCGGGGATA 3794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982112893600