Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq18755 192 1e-46 >seq18755 Length=6561 Score = 192 bits (212), Expect = 1e-46 Identities = 286/385 (74%), Gaps = 23/385 (6%) Strand=Plus/Plus Query 30 TTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCC 89 ||||||||| || ||||||| |||||| || ||||||| ||| || |||| || Sbjct 5461 TTTTCAACGCCGGTGGGTTCGGGCCTCCATGCGGT-GTTACCCGCACTT-CACCCTGGCC 5518 Query 90 ATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGAC 149 | || |||||| |||||||| |||||| || | | ||| |||||||| | |||| Sbjct 5519 AGGGG-TAGATCACCCGGTTT-CGGGTCGATGACG-ACAAACTTAACGCCCTATTCAGAC 5575 Query 150 TCGCTTTTCGCTACGCCTCCC-CTATTCGG--TTAAGCTT---TGCCACTGAAAATAAGT 203 ||||||| |||| || |||| || | | | |||| ||| |||| | || | | Sbjct 5576 TCGCTTT-CGCTTCGGCTCCGGCTTTCCTGCCTTAACCTTGCTTGCCGCC----ATCACT 5630 Query 204 CGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGT 263 ||| | |||| ||||||||| |||| ||||| || | | |||| ||||||||| Sbjct 5631 CGCCGGTTCATTCTACAAAAGGCACGCCGTCACATCTCACGGATG-CTCCGACTGCTTGT 5689 Query 264 ACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCT 323 | ||| ||||||||||| ||| ||||||||| ||| ||| ||| |||||| ||||||||| Sbjct 5690 AGGCACACGGTTTCAGGTTCTTTTTCACTCCGCTC-CCGCGGTGCTTTTCACCTTTCCCT 5748 Query 324 CACGGTACTAGTTCACTATCGGTCAGTCA-GTAGTATTTAGCCTT-GGAGGATGGTCCCC 381 ||||||||| ||||||||||| | || | ||||||||||||| ||||| |||||| | Sbjct 5749 CACGGTACT-CATCACTATCGGT-TGCCAGGGAGTATTTAGCCTTAGGAGG-TGGTCCTC 5805 Query 382 CCATATTCAGACAAAGTTTCTCGTG 406 ||| |||| || ||||| |||| Sbjct 5806 CCAGATTCCCACGGGGTTTCACGTG 5830 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241237142400