Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq18755 298 9e-79 >seq18755 Length=6561 Score = 298 bits (330), Expect = 9e-79 Identities = 233/278 (84%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| |||||||||||||| |||||||||||| |||||||||||||||| | Sbjct 522 CCCACGCTTTCGTGCCTCAGCGTCAGTCACTGTCCAGCAAGGCGCCTTCGCCACTGGTAT 581 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| ||||||||||||||||||||||||| |||||||| |||||||||||| || Sbjct 582 TCCTCCACATATCTACGCATTTCACCGCTACACGTGGAATTCCCCTTGCCTCTCCAGTAC 641 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 ||||| |||||||| || |||| | ||||||||||| |||||| | |||| Sbjct 642 TCAAGTCTCACAGTTTCCAAAGCAGTCCCAGGGTTGAGCCCTGGACTTTCACTCCAGACT 701 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | |||||||| | | |||||| |||| | | |||||| |||||||||| |||||| Sbjct 702 TATCAGACCGCCTACGCACGCTTTACGCCCAGTGATTCCGGACAACGCTTGCCCCCTACG 761 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 |||||||||||||||||||||||||||||||| ||||| Sbjct 762 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGGGGCTT 799 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828565352475