Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq18755 105 6e-21 >seq18755 Length=6561 Score = 105 bits (116), Expect = 6e-21 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||| |||||||||| || | ||| |||| |||||| | || |||||| |||| Sbjct 3817 GTTGAGCGACGGCCCTTCCACTCGGTACCGCCGGGTCACTAAGCCCGACTTTCGTCCCTG 3876 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| | ||| |||||||||||||| ||| |||| || |||| | | |||| || Sbjct 3877 CTCGACCTGTCCGTCTCGCAGTCAAGCTCCCTTGTGCCTTTACACTCTTCGCGCGATTTC 3936 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 | ||| | | || ||||| | || ||||||||| Sbjct 3937 CATCCGCGCTGAGGGAACCTTTGGGCGCCTCCGTTA 3972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473465915700