Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20aecidioides_20[genbank_20GCA_5F002157015.1_202017-05- 22] 29,225 sequences; 62,222,430 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq18755 475 8e-132 >seq18755 Length=6561 Score = 475 bits (526), Expect = 8e-132 Identities = 346/400 (87%), Gaps = 2/400 (1%) Strand=Plus/Minus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 803 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCAAGCGTTG 744 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 |||||||| ||||||||||||| ||||||||| ||| | |||||| | ||||||| | Sbjct 743 TCCGGAATCACTGGGCGTAAAGCGTGCGTAGGCGGTCTGATAAGTCTGGAGTGAAAGTCC 684 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTG 188 | |||||||||| ||||||||||| ||||||| | || |||| | |||| |||||| | Sbjct 683 AGGGCTCAACCCTGGGACTGCTTTGGAAACTGTGAGACTTGAGTACTGGAGAGGCAAGGG 624 Query 189 GAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCG 248 ||||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||| Sbjct 623 GAATTCCACGTGTAGCGGTGAAATGCGTAGATATGTGGAGGAATACCAGTGGCGAAGGCG 564 Query 249 GCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGAT 308 |||||||||| || |||||| ||||||| |||||||||||||||||||||||||||||| Sbjct 563 CCTTGCTGGACAGTGACTGACGCTGAGGCACGAAAGCGTGGGGAGCAAACAGGATTAGAT 504 Query 309 ACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCG 368 ||||||||||||||||||||||||||||| | |||||||| |||| | || | | Sbjct 503 ACCCTGGTAGTCCACGCCGTAAACGATGAGTGCTAGGTGTTGGGGGG--TACCACCCTCA 446 Query 369 GTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 |||||| || |||| ||||||| | ||| ||||||||||| Sbjct 445 GTGCCGAAGGAAACCCAATAAGCACTCCGCCTGGGGAGTA 406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1202848364800