Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq7669 102 2e-19 >seq7669 Length=1306 Score = 102 bits (112), Expect = 2e-19 Identities = 282/424 (67%), Gaps = 20/424 (5%) Strand=Plus/Plus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||||||| | | |||||||| Sbjct 432 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGT 491 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||| ||||| |||| | | | | ||| | | ||||| ||| ||||||||||||| Sbjct 492 ATCGTTAAATCATTCATGCAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGA 551 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAA----GAGCTT---CGCGTT 179 || | || | || ||||||| || | |||| ||| |||| ||||| || Sbjct 552 CCCTCATCGGTAAGGCCGCCATTGATTGGGGTTTCCTTCAAAACCTAGCTTATATTAGTC 611 Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239 ||||| | |||||| || || ||||||| |||||| | |||| | | | Sbjct 612 GGCTAAGAATCTTCGTTAACCAGCCAACATCGGGCAGAATTCACACTCAATACTTTGATT 671 Query 240 T-TCGTGTT-TGCAGAGTGCTGTGTTTTTAATAAACAGTCG--CAGCGGCCTGGTAT-CT 294 | || | || |||| |||||| |||||| | |||||||||| || | | ||| | Sbjct 672 TGTCATCTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCGTACAACACCACTCTATGCC 731 Query 295 TCGACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAA 354 || | | | | |||| | | ||| | | ||| |||||| |||| || Sbjct 732 TC--CTATCCTTAACTTA-----ATATTACTTAAGAAGGA-TGGCACACCTTATCCCTAA 783 Query 355 GTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCT 414 ||||||||| | ||||||| |||||||| ||| ||||| |||||| |||| || Sbjct 784 GTTACGGTGTCATTTTGCCGAGTTCCTTAATGATTGTTAACTCAAACGCCTTTGTATACT 843 Query 415 CTAC 418 |||| Sbjct 844 CTAC 847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260491419200