Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq7669 82.4 2e-13 >seq7669 Length=1306 Score = 82.4 bits (90), Expect = 2e-13 Identities = 251/384 (65%), Gaps = 33/384 (9%) Strand=Plus/Plus Query 9 ATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCGTTAC 68 |||| ||| | ||| ||||||||| ||| | || ||||||||| ||||||| Sbjct 440 ATCTGCACAGTTATTCCAATTTCACTGAGCCAATCATTGAGACAGCTGTTGTATCGTTAA 499 Query 69 GCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATA 128 | ||| ||| | | | | ||| | | ||||| ||| ||||||||||||||| | || Sbjct 500 ATCATTCATGCAAGACCGCATTTAACGGCCAAGGTATTCCGCTACCTTAGGACCCTCATC 559 Query 129 GTTACGGCCGCCGTTTACTGGGGCTTAAGTTCA----CT-GCTTCGATTGCT---CTAAC 180 | || ||||||| || | ||||| || |||| || |||| ||| | |||| Sbjct 560 GGTAAGGCCGCCATTGATTGGGG-TTTCCTTCAAAACCTAGCTTATATTAGTCGGCTAAG 618 Query 181 AGATC-CCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTG-CGA 238 | ||| | |||||| ||| || ||||||| ||| | |||| | | ||| | Sbjct 619 A-ATCTTCGTTAACCAGCCAACATCGGGCAGAATTCACACTCAATACTTTGATTTGTCAT 677 Query 239 CTTA-GCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGT 297 |||| ||| | || |||||| |||||||||| | | ||| ||| ||| | Sbjct 678 CTTATGCAAAGTGCTTTGTTTTAATTAAACAGTCGTACAACACCACTCTATGCCTCCTAT 737 Query 298 CAT--------------------AGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATT 337 | | || ||||| |||| |||||||||||||| |||||| Sbjct 738 CCTTAACTTAATATTACTTAAGAAGGATGGCACACCTTATCCCTAAGTTACGGTGTCATT 797 Query 338 TTGCCGAGTTCCTTAACAATAGTT 361 |||||||||||||||| || ||| Sbjct 798 TTGCCGAGTTCCTTAATGATTGTT 821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062139977600