Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20allii-populina_20[genbank_20GCA_5F002157005.1_202017- 05-22] 24,475 sequences; 44,530,309 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq12187 91.5 1e-13 >seq12187 Length=3801 Score = 91.5 bits (100), Expect = 1e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 66339 GCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAA 66398 ||||||||| ||| || ||||| || |||||||| || || || |||| || || Sbjct 2765 GCATAAATAAATCTGGAATCCATAGCGCGTAGAAAAGGTCACGCGCTCTACTTTCTTCCT 2706 Query 66399 TGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458 | ||||||||||| || | ||||| | ||||| | ||| || |||||||| || | || Sbjct 2705 TTCCGTGATTTTTACGTAGATCGAGCCAATCAAATACGTCTGCGTGCCATGGCTCAATGT 2646 Query 66459 AGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCG 66511 | || || || | || | |||| ||||||||||| ||||| | |||| Sbjct 2645 ATATCGCAAAAGCACCTGGTCTTTTGTTCCCACCTTGGTCAACGTATCTAGCG 2593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397449409814000