Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq21173 93.3 6e-17 seq17904 75.2 2e-11 >seq21173 Length=8966 Score = 93.3 bits (102), Expect = 6e-17 Identities = 82/100 (82%), Gaps = 2/100 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||| | ||| | |||| | ||||||||| ||| | Sbjct 7570 GTACAAAGGGCAGGGACGTAATCAACACCTGCTGG-TGACATACACTTACTAGGTATT-C 7513 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCA 100 || |||||||| || ||||||||| ||||||||||||| Sbjct 7512 CTTGTTGAAGAGAAATTATTGCAATGCTCTATCCCCATCA 7473 >seq17904 Length=6056 Score = 75.2 bits (82), Expect = 2e-11 Identities = 50/56 (89%), Gaps = 0/56 (0%) Strand=Plus/Plus Query 58 TTCCTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA 113 |||||||||||||| ||| |||||||||| |||||||||||||||| || ||||| Sbjct 2048 TTCCTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCATCACGACCAAGTTTCA 2103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751841485685