Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq9508 154 2e-35 >seq9508 Length=2187 Score = 154 bits (170), Expect = 2e-35 Identities = 126/151 (83%), Gaps = 3/151 (2%) Strand=Plus/Minus Query 100 TAGTCCCTCTAAGAAGCCAGCCA-CCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAG 158 ||||||||||||||||| | | ||| || ||| | | |||||||||||| ||| Sbjct 360 TAGTCCCTCTAAGAAGC--GTTAGCCAGCCGTAGCCAACCACACTATTTAGCAGGAGAAG 303 Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 || | ||||||||| | |||||| |||||||||||||||||||||||||||||||||||| Sbjct 302 GTTTTGTTCGTTATTGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 243 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTAT 249 ||||||| ||| | |||||||||| |||||| Sbjct 242 ACCACCAACCACAAAATCAAGAAAAAGCTAT 212 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796632042279