Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq13652 87.8 3e-15 seq8161 87.8 3e-15 >seq13652 Length=1387 Score = 87.8 bits (96), Expect = 3e-15 Identities = 94/122 (77%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||| ||||||| ||| | |||| ||| || || | Sbjct 606 GTACGAGAGGAACCGTTCA-TTCACGC-AATTGGTATTTACATCTGTTTGATAAGACACT 663 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | |||||||||| || ||||||||||||||||||||||||| |||||| ||| | Sbjct 664 GGTGTGAAGCTACCACATGTTGGATTATGGCTGAACGCCTCTAAGCTGGAATCCGTGCTA 723 Query 121 GA 122 || Sbjct 724 GA 725 >seq8161 Length=2326 Score = 87.8 bits (96), Expect = 3e-15 Identities = 94/122 (77%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||||| | |||| |||||||| ||| | |||| ||| || | | Sbjct 2101 GTACGAGAGGAACCGTTCA-TTCACG-TAATTGGTATTTACATCTGTTTGATAAGACCAT 2044 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | | ||||| |||| || ||||||||||||||||||||||||| ||||||| ||| | Sbjct 2043 GGTGTGAAGCGACCACGTGTTGGATTATGGCTGAACGCCTCTAAGCCAGAATCGGTGCTA 1984 Query 121 GA 122 || Sbjct 1983 GA 1982 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819027320576