Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05-
22] 21,759 sequences; 97,689,000 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq9033 98.7 8e-16
seq21128 84.2 2e-11
>seq9033
Length=2832
Score = 98.7 bits (108), Expect = 8e-16
Identities = 125/172 (73%), Gaps = 0/172 (0%)
Strand=Plus/Minus
Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399
|||||| | ||| || ||||| || |||||||| || || ||||||| || || |
Sbjct 1677 CATAAACAAATCTGGAATCCATAGTGCGTAGAAAAGGTCACGTGCTCTACTTTCTTCCTT 1618
Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459
|| |||||||| ||||||||||| | ||||| | || || |||||||| || | |||
Sbjct 1617 TCCATGATTTTTACGCAAGTCGAGCCAATCAAATACATCTGCGTGCCATGGCTCAATGTA 1558
Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCG 66511
||| ||||| | ||| | |||| || ||||| || ||||| | ||||
Sbjct 1557 GATTGCGAAAGCACCCGCTCTTTTGTTCCCGCCTTGATCAACGTATCTAGCG 1506
>seq21128
Length=23319
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 66512 ACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCG 66571
||||||||||||||||||||||| || |||| ||| || || | || ||||| || |
Sbjct 16166 ACATTGTTGAAGACACGCAACATGGGAACGATCCCATTTGAGTACCCGTTGGTACCAGCA 16225
Query 66572 ATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTC 66631
||| || ||||| ||||| |||| ||| ||||| || ||||| || |||||
Sbjct 16226 ATGTAACTACCAGTGGCCCGGATATCATGAATATTGAGACCGATTCCACCAGCTGTCTTG 16285
Query 66632 GAGATGGCAGCACA 66645
||||| ||||||
Sbjct 16286 GAGATCATAGCACA 16299
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397462569811760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |