Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Melampsora_20occidentalis_20[genbank_20GCA_5F002157085.1_202017-05- 22] 21,759 sequences; 97,689,000 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq9033 98.7 8e-16 seq21128 84.2 2e-11 >seq9033 Length=2832 Score = 98.7 bits (108), Expect = 8e-16 Identities = 125/172 (73%), Gaps = 0/172 (0%) Strand=Plus/Minus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 |||||| | ||| || ||||| || |||||||| || || ||||||| || || | Sbjct 1677 CATAAACAAATCTGGAATCCATAGTGCGTAGAAAAGGTCACGTGCTCTACTTTCTTCCTT 1618 Query 66400 GCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGTA 66459 || |||||||| ||||||||||| | ||||| | || || |||||||| || | ||| Sbjct 1617 TCCATGATTTTTACGCAAGTCGAGCCAATCAAATACATCTGCGTGCCATGGCTCAATGTA 1558 Query 66460 GATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGCGAGCG 66511 ||| ||||| | ||| | |||| || ||||| || ||||| | |||| Sbjct 1557 GATTGCGAAAGCACCCGCTCTTTTGTTCCCGCCTTGATCAACGTATCTAGCG 1506 >seq21128 Length=23319 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 66512 ACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGCCGTCG 66571 ||||||||||||||||||||||| || |||| ||| || || | || ||||| || | Sbjct 16166 ACATTGTTGAAGACACGCAACATGGGAACGATCCCATTTGAGTACCCGTTGGTACCAGCA 16225 Query 66572 ATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCCGTCTTC 66631 ||| || ||||| ||||| |||| ||| ||||| || ||||| || ||||| Sbjct 16226 ATGTAACTACCAGTGGCCCGGATATCATGAATATTGAGACCGATTCCACCAGCTGTCTTG 16285 Query 66632 GAGATGGCAGCACA 66645 ||||| |||||| Sbjct 16286 GAGATCATAGCACA 16299 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397462569811760