Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq21 334 1e-89 seq11 334 1e-89 seq9 334 1e-89 >seq21 Length=35739 Score = 334 bits (370), Expect = 1e-89 Identities = 255/299 (85%), Gaps = 2/299 (1%) Strand=Plus/Plus Query 12 GCCGGGCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70 || ||| ||| ||| |||| || | || ||| ||||||||||||||| | || ||||| Sbjct 8200 GCGGGGACTTACCTCCTGGTGAACTGCCATGTCCTTCACTGGGTGTGGTAGCGAACCAGG 8259 Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 || ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 8260 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATACATTAGCAT 8319 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||||||||||||||| ||| | | ||||||||||||||| || |||||||||||| Sbjct 8320 GGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCGCCGTAATGAT 8379 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||||||| ||||| | |||||| | ||||||||||||||||||||||| Sbjct 8380 TAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTTGGATTGCC 8439 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 |||||| ||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct 8440 GGAAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAA 8497 Score = 334 bits (370), Expect = 1e-89 Identities = 255/299 (85%), Gaps = 2/299 (1%) Strand=Plus/Plus Query 12 GCCGGGCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70 || ||| ||| ||| |||| || | || ||| ||||||||||||||| | || ||||| Sbjct 16760 GCGGGGACTTACCTCCTGGTGAACTGCCATGTCCTTCACTGGGTGTGGTAGCGAACCAGG 16819 Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 || ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 16820 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATACATTAGCAT 16879 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||||||||||||||| ||| | | ||||||||||||||| || |||||||||||| Sbjct 16880 GGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCGCCGTAATGAT 16939 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||||||| ||||| | |||||| | ||||||||||||||||||||||| Sbjct 16940 TAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTTGGATTGCC 16999 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 |||||| ||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct 17000 GGAAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAA 17057 Score = 334 bits (370), Expect = 1e-89 Identities = 255/299 (85%), Gaps = 2/299 (1%) Strand=Plus/Plus Query 12 GCCGGGCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70 || ||| ||| ||| |||| || | || ||| ||||||||||||||| | || ||||| Sbjct 25320 GCGGGGACTTACCTCCTGGTGAACTGCCATGTCCTTCACTGGGTGTGGTAGCGAACCAGG 25379 Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 || ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 25380 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATACATTAGCAT 25439 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||||||||||||||| ||| | | ||||||||||||||| || |||||||||||| Sbjct 25440 GGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCGCCGTAATGAT 25499 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||||||| ||||| | |||||| | ||||||||||||||||||||||| Sbjct 25500 TAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTTGGATTGCC 25559 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 |||||| ||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct 25560 GGAAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAA 25617 Score = 271 bits (300), Expect = 1e-70 Identities = 249/299 (83%), Gaps = 12/299 (4%) Strand=Plus/Plus Query 14 CGGGCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGAC 72 |||| ||| ||| |||| || | || ||| ||||||||||||||| | || |||| || Sbjct 33812 CGGGACTTACCTCCTGGTGAACTGCCATGTCCTTCACTGGGTGTGGTAGCGAACCAG-AC 33870 Query 73 TTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGG 132 ||||||| |||||||||||||||| |||||||| ||| || ||||||||| ||||||| Sbjct 33871 GTTTACTT-GAAAAAATTAGAGTGT-CAAAGCAG-CCTACGC-CGAATACAT-AGCATGG 33925 Query 133 AA-TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAAT-GAT 190 || ||||||||||||||| ||| ||| |||| |||||||||| || ||||||||| ||| Sbjct 33926 AAATAATAGAATAGGACGCGCG-TTCCATTT-GTTGGTTTCTGAGATCGCCGTAATTGAT 33983 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||||||| ||||| | |||||| | ||||||||||||||||||||||| Sbjct 33984 TAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTTGGATTGCC 34043 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 |||||| ||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct 34044 GGAAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAA 34101 >seq11 Length=1446674 Score = 334 bits (370), Expect = 1e-89 Identities = 255/299 (85%), Gaps = 2/299 (1%) Strand=Plus/Plus Query 12 GCCGGGCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70 || ||| ||| ||| |||| || | || ||| ||||||||||||||| | || ||||| Sbjct 1441283 GCGGGGACTTACCTCCTGGTGAACTGCCATGTCCTTCACTGGGTGTGGTAGCGAACCAGG 1441342 Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 || ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 1441343 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATACATTAGCAT 1441402 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||||||||||||||| ||| | | ||||||||||||||| || |||||||||||| Sbjct 1441403 GGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCGCCGTAATGAT 1441462 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||||||| ||||| | |||||| | ||||||||||||||||||||||| Sbjct 1441463 TAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTTGGATTGCC 1441522 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 |||||| ||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct 1441523 GGAAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAA 1441580 >seq9 Length=38597 Score = 334 bits (370), Expect = 1e-89 Identities = 255/299 (85%), Gaps = 2/299 (1%) Strand=Plus/Minus Query 12 GCCGGGCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70 || ||| ||| ||| |||| || | || ||| ||||||||||||||| | || ||||| Sbjct 4122 GCGGGGACTTACCTCCTGGTGAACTGCCATGTCCTTCACTGGGTGTGGTAGCGAACCAGG 4063 Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 || ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 4062 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATACATTAGCAT 4003 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||||||||||||||| ||| | | ||||||||||||||| || |||||||||||| Sbjct 4002 GGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCGCCGTAATGAT 3943 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||||||| ||||| | |||||| | ||||||||||||||||||||||| Sbjct 3942 TAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTTGGATTGCC 3883 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 |||||| ||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct 3882 GGAAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAA 3825 Score = 334 bits (370), Expect = 1e-89 Identities = 255/299 (85%), Gaps = 2/299 (1%) Strand=Plus/Minus Query 12 GCCGGGCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70 || ||| ||| ||| |||| || | || ||| ||||||||||||||| | || ||||| Sbjct 12685 GCGGGGACTTACCTCCTGGTGAACTGCCATGTCCTTCACTGGGTGTGGTAGCGAACCAGG 12626 Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 || ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 12625 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATACATTAGCAT 12566 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||||||||||||||| ||| | | ||||||||||||||| || |||||||||||| Sbjct 12565 GGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCGCCGTAATGAT 12506 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||||||| ||||| | |||||| | ||||||||||||||||||||||| Sbjct 12505 TAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTTGGATTGCC 12446 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 |||||| ||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct 12445 GGAAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAA 12388 Score = 334 bits (370), Expect = 1e-89 Identities = 255/299 (85%), Gaps = 2/299 (1%) Strand=Plus/Minus Query 12 GCCGGGCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70 || ||| ||| ||| |||| || | || ||| ||||||||||||||| | || ||||| Sbjct 21246 GCGGGGACTTACCTCCTGGTGAACTGCCATGTCCTTCACTGGGTGTGGTAGCGAACCAGG 21187 Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 || ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 21186 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATACATTAGCAT 21127 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||||||||||||||| ||| | | ||||||||||||||| || |||||||||||| Sbjct 21126 GGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCGCCGTAATGAT 21067 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||||||||||| ||||| | |||||| | ||||||||||||||||||||||| Sbjct 21066 TAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTTGGATTGCC 21007 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 |||||| ||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct 21006 GGAAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAA 20949 Score = 325 bits (360), Expect = 7e-87 Identities = 254/299 (85%), Gaps = 3/299 (1%) Strand=Plus/Minus Query 12 GCCGGGCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGG 70 || ||| ||| ||| |||| || | || ||| ||||||||||||||| | || ||||| Sbjct 29809 GCGGGGACTTACCTCCTGGTGAACTGCCATGTCCTTCACTGGGTGTGGTAGCGAACCAGG 29750 Query 71 ACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCAT 130 || ||||||||||||||||||||||||||||||||||||| || ||||||||||||||| Sbjct 29749 ACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATACATTAGCAT 29690 Query 131 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGAT 190 ||||||||||||||||||| ||| | | ||||||||||||||| || |||||||||||| Sbjct 29689 GGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCGCCGTAATGAT 29630 Query 191 TAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTAT 250 ||||| ||||||| ||||| | |||||| | ||||||||||||||||||||||| Sbjct 29629 TAATA-GGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCTTGGATTGCC 29571 Query 251 TGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAA 309 |||||| ||||||||||||||| || ||||||||||||||||| |||| ||||||| Sbjct 29570 GGAAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATCA-AGAACGAA 29513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915199780352