Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq21 95.1 7e-18 seq11 95.1 7e-18 seq9 95.1 7e-18 >seq21 Length=35739 Score = 95.1 bits (104), Expect = 7e-18 Identities = 66/71 (93%), Gaps = 3/71 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 633 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 576 Query 109 TAATACAACGC 119 |||| |||||| Sbjct 575 TAAT-CAACGC 566 Score = 95.1 bits (104), Expect = 7e-18 Identities = 66/71 (93%), Gaps = 3/71 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 9192 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 9135 Query 109 TAATACAACGC 119 |||| |||||| Sbjct 9134 TAAT-CAACGC 9125 Score = 95.1 bits (104), Expect = 7e-18 Identities = 66/71 (93%), Gaps = 3/71 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 17751 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 17694 Query 109 TAATACAACGC 119 |||| |||||| Sbjct 17693 TAAT-CAACGC 17684 Score = 95.1 bits (104), Expect = 7e-18 Identities = 66/71 (93%), Gaps = 3/71 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 26311 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 26254 Query 109 TAATACAACGC 119 |||| |||||| Sbjct 26253 TAAT-CAACGC 26244 Score = 95.1 bits (104), Expect = 7e-18 Identities = 66/71 (93%), Gaps = 3/71 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 34795 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 34738 Query 109 TAATACAACGC 119 |||| |||||| Sbjct 34737 TAAT-CAACGC 34728 >seq11 Length=1446674 Score = 95.1 bits (104), Expect = 7e-18 Identities = 66/71 (93%), Gaps = 3/71 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 1442274 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 1442217 Query 109 TAATACAACGC 119 |||| |||||| Sbjct 1442216 TAAT-CAACGC 1442207 >seq9 Length=38597 Score = 95.1 bits (104), Expect = 7e-18 Identities = 66/71 (93%), Gaps = 3/71 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 3130 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 3187 Query 109 TAATACAACGC 119 |||| |||||| Sbjct 3188 TAAT-CAACGC 3197 Score = 95.1 bits (104), Expect = 7e-18 Identities = 66/71 (93%), Gaps = 3/71 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 11693 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 11750 Query 109 TAATACAACGC 119 |||| |||||| Sbjct 11751 TAAT-CAACGC 11760 Score = 95.1 bits (104), Expect = 7e-18 Identities = 66/71 (93%), Gaps = 3/71 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 20256 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 20313 Query 109 TAATACAACGC 119 |||| |||||| Sbjct 20314 TAAT-CAACGC 20323 Score = 95.1 bits (104), Expect = 7e-18 Identities = 66/71 (93%), Gaps = 3/71 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||||||||| || ||||||||| ||||||||||| |||||||||||||||||||| Sbjct 28817 CTCACTAAGCCATT-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACG 28874 Query 109 TAATACAACGC 119 |||| |||||| Sbjct 28875 TAAT-CAACGC 28884 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300799932320