Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq21 215 5e-54 seq11 215 5e-54 seq9 215 5e-54 >seq21 Length=35739 Score = 215 bits (238), Expect = 5e-54 Identities = 160/186 (86%), Gaps = 1/186 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 |||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct 8252 GAACCAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATAC 8311 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 |||| |||||||||||||||||||||| ||| | | ||||||| ||||||| || || | Sbjct 8312 ATTAGCATGGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCG-C 8370 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||||||| ||||| | |||||| | |||| |||||||||||| Sbjct 8371 CGTAATGATTAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCT 8430 Query 182 TGGATT 187 |||||| Sbjct 8431 TGGATT 8436 Score = 215 bits (238), Expect = 5e-54 Identities = 160/186 (86%), Gaps = 1/186 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 |||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct 16812 GAACCAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATAC 16871 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 |||| |||||||||||||||||||||| ||| | | ||||||| ||||||| || || | Sbjct 16872 ATTAGCATGGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCG-C 16930 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||||||| ||||| | |||||| | |||| |||||||||||| Sbjct 16931 CGTAATGATTAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCT 16990 Query 182 TGGATT 187 |||||| Sbjct 16991 TGGATT 16996 Score = 215 bits (238), Expect = 5e-54 Identities = 160/186 (86%), Gaps = 1/186 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 |||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct 25372 GAACCAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATAC 25431 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 |||| |||||||||||||||||||||| ||| | | ||||||| ||||||| || || | Sbjct 25432 ATTAGCATGGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCG-C 25490 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||||||| ||||| | |||||| | |||| |||||||||||| Sbjct 25491 CGTAATGATTAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCT 25550 Query 182 TGGATT 187 |||||| Sbjct 25551 TGGATT 25556 Score = 150 bits (166), Expect = 2e-34 Identities = 155/188 (82%), Gaps = 11/188 (6%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 ||||||| || ||||||| ||||||||||||| || |||||||| ||| || ||||||| Sbjct 33862 GAACCAG-ACGTTTACTT-GAAAAAATTAGAGTGT-CAAAGCAG-CCTACGC-CGAATAC 33916 Query 62 ATTACCATGGAA-TAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 || | ||||||| ||||||||||||||| ||| ||| |||| || ||||||| || ||| Sbjct 33917 AT-AGCATGGAAATAATAGAATAGGACGCGCG-TTCCATTT-GTTGGTTTCTGAGATCGC 33973 Query 121 CCGTAAT-GATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATT 179 | ||||| ||| |||| ||||||| ||||| | |||||| | |||| |||||||||| Sbjct 33974 C-GTAATTGATTAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATT 34032 Query 180 CTTGGATT 187 |||||||| Sbjct 34033 CTTGGATT 34040 >seq11 Length=1446674 Score = 215 bits (238), Expect = 5e-54 Identities = 160/186 (86%), Gaps = 1/186 (1%) Strand=Plus/Plus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 |||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct 1441335 GAACCAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATAC 1441394 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 |||| |||||||||||||||||||||| ||| | | ||||||| ||||||| || || | Sbjct 1441395 ATTAGCATGGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCG-C 1441453 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||||||| ||||| | |||||| | |||| |||||||||||| Sbjct 1441454 CGTAATGATTAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCT 1441513 Query 182 TGGATT 187 |||||| Sbjct 1441514 TGGATT 1441519 >seq9 Length=38597 Score = 215 bits (238), Expect = 5e-54 Identities = 160/186 (86%), Gaps = 1/186 (1%) Strand=Plus/Minus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 |||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct 4070 GAACCAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATAC 4011 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 |||| |||||||||||||||||||||| ||| | | ||||||| ||||||| || || | Sbjct 4010 ATTAGCATGGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCG-C 3952 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||||||| ||||| | |||||| | |||| |||||||||||| Sbjct 3951 CGTAATGATTAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCT 3892 Query 182 TGGATT 187 |||||| Sbjct 3891 TGGATT 3886 Score = 215 bits (238), Expect = 5e-54 Identities = 160/186 (86%), Gaps = 1/186 (1%) Strand=Plus/Minus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 |||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct 12633 GAACCAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATAC 12574 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 |||| |||||||||||||||||||||| ||| | | ||||||| ||||||| || || | Sbjct 12573 ATTAGCATGGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCG-C 12515 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||||||| ||||| | |||||| | |||| |||||||||||| Sbjct 12514 CGTAATGATTAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCT 12455 Query 182 TGGATT 187 |||||| Sbjct 12454 TGGATT 12449 Score = 215 bits (238), Expect = 5e-54 Identities = 160/186 (86%), Gaps = 1/186 (1%) Strand=Plus/Minus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 |||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct 21194 GAACCAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATAC 21135 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 |||| |||||||||||||||||||||| ||| | | ||||||| ||||||| || || | Sbjct 21134 ATTAGCATGGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCG-C 21076 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||||||| ||||| | |||||| | |||| |||||||||||| Sbjct 21075 CGTAATGATTAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCT 21016 Query 182 TGGATT 187 |||||| Sbjct 21015 TGGATT 21010 Score = 212 bits (234), Expect = 6e-53 Identities = 160/186 (86%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 2 GAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATAC 61 |||||||||| ||||||||||||||||||||| ||||||||||||||| || ||||||| Sbjct 29757 GAACCAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAATAC 29698 Query 62 ATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCC 121 |||| |||||||||||||||||||||| ||| | | ||||||| ||||||| || || | Sbjct 29697 ATTAGCATGGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATCG-C 29639 Query 122 CGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCT 181 ||||||||| |||| ||||||| ||||| | |||||| | |||| |||||||||||| Sbjct 29638 CGTAATGATTAATA-GGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATTCT 29580 Query 182 TGGATT 187 |||||| Sbjct 29579 TGGATT 29574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511999880960