Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07- 16] 24 sequences; 23,461,035 total letters Query= AAMG01002120.1 Length=347 Score E Sequences producing significant alignments: (Bits) Value seq13 84.2 4e-14 >seq13 Length=1203898 Score = 84.2 bits (92), Expect = 4e-14 Identities = 155/224 (69%), Gaps = 10/224 (4%) Strand=Plus/Minus Query 49 TTCACCGTGGTTGCCCTCGGCGTTGTTCAGGCCGAACAGGCGCTCCTTGATGATTCCATC 108 ||| ||||||||||||| | | ||| ||| |||| |||||||||| ||| || Sbjct 1111894 TTCGCCGTGGTTGCCCTGGTGCCCGGTCACGCCAAACATTCGCTCCTTGAGGATCGAGTC 1111835 Query 109 G-CGCTCGTTCCACAGGGCCAGGCCCAGGCACCAACGTTGCGCC----TTGTCACTGAAC 163 | ||| |||||||||| | | | | |||| || ||| |||||||| | | Sbjct 1111834 GACGC-CGTTCCACAGACCGACGGAGAAGCACATGCG----GCCATGATTGTCACTAATC 1111780 Query 164 CCCGCCAGGCCGTCCTCGCCCCAACGGTAGGCGCGGCTGCGTGCATGGTCATGGGGGAAG 223 || || || || || |||||||| || || || || ||| ||||| || || |||||| Sbjct 1111779 CCGGCAAGTCCATCTTCGCCCCAGCGATACGCTCGCGAGCGAGCATGCTCGTGAGGGAAG 1111720 Query 224 TAGGCCCAGGCGTCGCCATCGGCGCTGTAGTCTTCGCGCACCGT 267 | || ||| || || |||| || |||||| || || ||||| Sbjct 1111719 TGGGACCAAGCATCACCATTTGCCGAGTAGTCCTCACGGACCGT 1111676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1007999758080