Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_010671.1
Length=124279
Score E
Sequences producing significant alignments: (Bits) Value
seq2 250 2e-61
seq6 89.7 4e-13
>seq2
Length=936589
Score = 250 bits (276), Expect = 2e-61
Identities = 761/1157 (66%), Gaps = 48/1157 (4%)
Strand=Plus/Minus
Query 65783 TCGTACGGCATACCCATCAGGACA--AAAGTGTCGGCCAGACCTTGAACTCCAATACCGA 65840
||| ||||||| ||| ||| || || | |||||||| ||||| ||||| || ||||
Sbjct 4459 TCGAACGGCATCGCCA--AGGCCATGAACGCGTCGGCCAACCCTTGCACTCCGATGCCGA 4402
Query 65841 TGGGACGATGACGCAAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGA 65900
||||||| || || || ||||| | |||||| || |||||||| |||| ||||
Sbjct 4401 TGGGACGGTGGCGGAAGTTGGAGTTTTGCGCCTCGATGACGGGGTAGTAGTTGACGTCGA 4342
Query 65901 TAATGCGATTCAAATTGCGTGTCACCACATGCACGATA-CGTCGCAATTGTTCGAAATCA 65959
| ||||| ||||| ||| | || || | ||| ||| ||| | | ||| |||
Sbjct 4341 TGATGCGGTTCAAGTTGAACGCGACGACCTTGGCGACCTCGT-GCAGCTTCTTGAAGTCA 4283
Query 65960 AAATGTTTAGGACGATCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCG 66019
| | | || || || || || || || || | | | || ||
Sbjct 4282 TAC-----ACGCCGTTCTTGA-TG-----------AAGCTCGGCAACG-CGATCGAGGCC 4241
Query 66020 AGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTA 66079
| |||||| || || |||||| || || | ||||||| || |||||||||| ||
Sbjct 4240 AAGTTGCAAACGGCGCACTCGTCGGGGGCCGAGTACTCGATGATCTCGGTGCACAAGTTG 4181
Query 66080 CTGCAGCGTATGGTGCCCAAATTCTGTTGATT--ACT-CTTGCGATTGCATGCATCCTTG 66136
| |||||||| | ||||| || || ||| |||| | || || ||||||
Sbjct 4180 GACGACTTGATGGTGCCGAGATTCTTCTGGTTCGACTTCTTGT--TCGCG-GCGTCCTTG 4124
Query 66137 TACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA--- 66193
|| | |||| | || | |||||||| || |||| ||| | ||| |||| ||||||
Sbjct 4123 TAGAGCATGAAGGGGTTACCGGTCTCGACCTGGGCCTCGAGGATCGCGTACCAAAGCTTT 4064
Query 66194 -GCGCGTGCCT--TCACCGTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGG 66250
||||| | | || | | | | ||||| |||| ||||| | ||| | | |
Sbjct 4063 TGCGCGGGGATCGTCTTCTTGGCT-CGGCCCT-CCTTC----TCGTACTTTTCAAACAAG 4010
Query 66251 TGTTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGC 66310
||| || || | || ||| |||| || || | || || | |||
Sbjct 4009 ACGCGGAACTCCTCGCCATAGACCTCGTGGAGACCCGGTGCCTCGGCGGGGCAGAACAGG 3950
Query 66311 GACCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAG 66370
| ||| ||||| | || ||||| ||| || ||||| || |||||||| ||| ||
Sbjct 3949 GGCCAGTCACCGGCGGCCTCGACACGCTCCATGAAGAGATCGGGGATCCAGAGCGCGAAG 3890
Query 66371 AAGAGATCGCGTGCTCGTTGCTCCTCAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCA 66430
||||||||||| || || ||||| ||||||| || ||||| | |||||||||||||
Sbjct 3889 AAGAGATCGCGAGCGCGGACTTCCTCCTTGCCGTGGTTCTTGCGAAGGTCGAGGAACTCA 3830
Query 66431 AAGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCA 66490
|||| |||||| ||||| || || ||||||||||| || | || || ||| ||||
Sbjct 3829 AAGACGTCGGCGTGCCACGGCTCGAGGTAGATGGCAAAAGCCCCGGGGCGCTTGTTGCCA 3770
Query 66491 CCTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTA 66550
||||||||||||||||| ||| |||||| |||| || | ||| || |||| |||||
Sbjct 3769 CCTTGGTCGACGTAGCGTGCGGTGTTGTTGTAGACGCGGAGCATGGGGACGATGCCGTTC 3710
Query 66551 GATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGA 66610
|| | ||| || || ||| ||||| || || || || || | ||| | |||
Sbjct 3709 GAGTAGCCGTTCGTCCCGGCGATGTACGAGCCGGTCGCGCGGATGTTGTGGATGCTCAAG 3650
Query 66611 CCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGC--CACTGTCCGGAATATGC 66668
|| || |||||||| ||||| |||||| ||| | || | | || | | ||||
Sbjct 3649 CCGATGCCACCGGCGGTCTTGGAGATG--AGCGCGCACGTCTTGAGCGTATCGTAGATGC 3592
Query 66669 CGTCAATGGAGTCACCCTTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTG 66728
| || || ||||| |||| || || | | | |||| || || || || | ||| |
Sbjct 3591 CTTCGATCGAGTCGTCCTTCATCGTGACCAAGAAGCACGACGAGAGCTGCGGGTGGGGCG 3532
Query 66729 TGGCGGCCGAGAAGAGGGTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGT 66788
| |||| |||||| || || | ||||| || ||||| | |||||| ||||
Sbjct 3531 TACCGGCGTTGAAGAGCGTCGGCGAGGCGTGGGTGAAGTAGCGCTCGGACATGAGGTTGT 3472
Query 66789 ACGTCTCGATGACAGCATCAATGTTTTCGCCATGAATCCCGAGTGC-ACATCGCATCAGG 66847
||| || | ||| || |||| | | || || |||| || ||| ||||| ||
Sbjct 3471 ACGACTGCAGGACGCGCTCGATGTCATGACTGTGGATGCCGACGGCGACA-CGCATGAGC 3413
Query 66848 AGGTATTGAGGCCGTTCGACCAGCCGATCCTTGATATGCATTAAGTAGGAGCGTTCCAGG 66907
| || ||| || |||||| | | | | | ||| | | ||||||||||| || ||
Sbjct 3412 ATGTGTTGCGGGCGTTCGGCAACCTTGCCGTCGATGCGAAGCAAGTAGGAGCGCTCAAGC 3353
Query 66908 GTCTTGATACCAAAGTA 66924
||||||| ||||||||
Sbjct 3352 GTCTTGAAGCCAAAGTA 3336
>seq6
Length=2534666
Score = 89.7 bits (98), Expect = 4e-13
Identities = 161/234 (69%), Gaps = 5/234 (2%)
Strand=Plus/Minus
Query 61087 ATTTGGCGCATGTACAAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTG 61146
|| ||| |||||||||| | || |||| ||||||||| ||| || ||| |||| |
Sbjct 1722380 ATCTGGGCCATGTACAAACAAGCACAAGCGTCCTTCTGGTCGGCCGAAGAGATCGACCTC 1722321
Query 61147 TCCAAAGACATGAATGACTGGGAGC----GTTTATCGAGCGGTGAACAACATTTCATTAA 61202
||| ||| || | |||||| | | | | | | | || ||||| | ||| |
Sbjct 1722320 GGCAACGACCTGCACGACTGGCACCACAAGCTCAACAA-CGATGAACGCTACTTCGTCGC 1722262
Query 61203 ACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACG 61262
|| ||| | || ||||| ||||| ||||| || | || ||||||||||| | ||| |
Sbjct 1722261 CCACGTGCTCGCCTTCTTCGCCGCCTCGGATGGGGTTGTGAATGAGAATTTGGTCGAAAG 1722202
Query 61263 TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGAT 61316
||| || |||||||| | |||||||| | || || |||||||| || ||
Sbjct 1722201 GTTCTCGAGTGAGGTGCAGTTCGCGGAGGCGAGGTGCTTTTACGGCTTTCAAAT 1722148
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397567883711360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |