Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20intermedium_20[genbank_20GCA_5F900096595.1_202017-07-
16] 24 sequences; 23,461,035 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq20 86.0 3e-11
seq11 86.0 3e-11
>seq20
Length=1861728
Score = 86.0 bits (94), Expect = 3e-11
Identities = 134/190 (71%), Gaps = 4/190 (2%)
Strand=Plus/Minus
Query 349034 aGGTAGACCGACGCATTG--GGCTTCTTCATCTTGGGCGTGGCGTCGAGAATCTCCTTGA 349091
|||||||||| | || | ||| |||| | ||| | | ||| || || |||||||
Sbjct 1092599 AGGTAGACCGTC--ATCGACGGCGTCTTGAGGTTGACGGCGACGTTGATGATTTCCTTGA 1092542
Query 349092 GTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGA 349151
| | |||| || || ||||||||||||| || || ||||| | ||||| || | ||
Sbjct 1092541 GACGCGGCACACCGAGCGTCACGTTCTTGGACGACACACCGGCGTAATGGAACGTGTTGA 1092482
Query 349152 GGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGC 349211
| |||| |||||| ||||| ||||| |||| ||||||| | || |||||| |
Sbjct 1092481 GCGTCATCTGCGTCGCTGGCTCACCGATCGACTGCGCCGCGAGCGTACCGCACATCTCAC 1092422
Query 349212 CGGGCGCGGC 349221
| ||||| ||
Sbjct 1092421 CCGGCGCCGC 1092412
>seq11
Length=1446674
Score = 86.0 bits (94), Expect = 3e-11
Identities = 332/512 (65%), Gaps = 31/512 (6%)
Strand=Plus/Minus
Query 88661 GCCCTGCCTGTTCGAGTACGTCTACTTTGCCCACCCAAACTCGGTGCTCGACGGTATACC 88720
|||| | |||||||||||||||||||||||| ||| ||||||| ||||||||||| |
Sbjct 459491 GCCCGACATGTTCGAGTACGTCTACTTTGCCCGCCCCGACTCGGTCCTCGACGGTATCTC 459432
Query 88721 GGTCTACGGGGCGCGTCTGGAGATGGG-CAGGTTGTTGGCTGCCCGCATCAGGCATGTG- 88778
||||||| | | || ||| |||||| | | | ||||||| | | || | |
Sbjct 459431 GGTCTACCGATCACGCATGGCGATGGGTGACGCT-TTGGCTG-----AGAATGCGCGCGC 459378
Query 88779 CTGAGT-GCCGAGCAACTGG--CCGAGGTGCAGTGCGTGATCGCCGTGCCGGAGACGGCG 88835
| | | ||||| |||| | |||| | ||| ||| ||||||| || ||| |
Sbjct 459377 CCGCCTCGCCGA--CGCTGGTATCAAGGTCGATGTCGTCATCCCCGTGCCCGACACGTCT 459320
Query 88836 CGGATCGCGGCGGGCCAAGTGGCCTACGAGCTCGGCCTGCCTCTGCGCGAGGGCCTGCTC 88895
|| |||| || ||||| || | |||||| |||| || || ||| | ||
Sbjct 459319 CGTGTCGCTGCTCTGCAAGTCGCGCAAAAGCTCGATGTGCCGTACCGTGAAGGCTTCGTC 459260
Query 88896 AGGAACCGGTACCAGACAAGCACTCTGGCCAGGACCTTCATCATGGCCGATGCCGAGAGC 88955
| |||||| ||| | | |||| | || ||||||||| ||| | |||| |
Sbjct 459259 AAGAACCGCTAC--GTC---------GGCC-GAACATTCATCATGCCCGGTCAAGAGATC 459212
Query 88956 CGCGGACGGGCCGTGGCGCGCAAGTTCACCGCCGTGGGCCGAGAGTGCAGGGACAAGGCC 89015
|| | | |||| |||||| ||| ||| ||| |||| || || ||
Sbjct 459211 CGACGCAAGAACGTGCGACGCAAGCTCAACGCGATGGCGTTGGAGTTCAACGAAAA---A 459155
Query 89016 GTGGTCGTG---GTGGACGACTCTGTCGTGCGCGGCACCACATCCAAGTTCATAATCGAC 89072
|||||| || || |||||||| ||||||| || || || || || || ||| |
Sbjct 459154 GTGGTCTTGATCGTCGACGACTCGATCGTGCGAGGGACGACCTCGAAAGAGATCATCCAG 459095
Query 89073 CTCCTTCGCAAGTCTGGCGCCACCAAGGTCTACCTCGCTTCTTGCTCTCCCCCGATCCGT 89132
| || | | || || | |||||| | | || ||| | || ||||||||
Sbjct 459094 ATGGCCCGTGACGCGGGAGCGAAGAAGGTCATCATGGCCAGTTGTGCGCCGCCGATCCGA 459035
Query 89133 TACCCCAACGTGTACGGCATCGACATACCGTC 89164
||||| ||||| |||||||| || || |||||
Sbjct 459034 TACCCGAACGTTTACGGCATTGATATGCCGTC 459003
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2084738543307152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |