Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900008665.1_202016-07-08] 5,182 sequences; 26,789,479 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq1170 327 2e-87 >seq1170 Length=1587 Score = 327 bits (362), Expect = 2e-87 Identities = 261/310 (84%), Gaps = 3/310 (1%) Strand=Plus/Plus Query 1 TACTTGGTCCGGCCGGGCCTTTCCTTCTGGGGATCCGC-ATGCCCTTCACTGGGTGTGCC 59 |||||| || | | ||| ||| ||| |||| || | || ||| |||| |||||||||| Sbjct 1017 TACTTGCTCTG-CGGGGACTTACCTCCTGGTGAACTGCCATGTCCTTTACTGGGTGTGGT 1075 Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA 119 | | ||||||| ||||||||||||||||||||||||||||||||||||| || |||| Sbjct 1076 AGCAAACCAGGACGTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTACGCCCGAA 1135 Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACC 179 |||||||||||||||||||||||||||||| ||| | | ||||||||||||||| || | Sbjct 1136 TACATTAGCATGGAATAATAGAATAGGACGCGCGTTCCCATTTTGTTGGTTTCTGAGATC 1195 Query 180 GCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATT 239 |||||||||||||||||||||||| ||||| | |||||| | ||||||||||||||| Sbjct 1196 GCCGTAATGATTAATAGGGATAGTTGGGGGCATTTGTATTCCGTCGTCAGAGGTGAAATT 1255 Query 240 CTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATC 299 |||||||| |||||| ||||||||||||||| || ||||||||||||||||| ||| Sbjct 1256 CTTGGATTGCCGGAAGACAAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTGATC 1315 Query 300 AGTGAACGAA 309 | ||||||| Sbjct 1316 A-AGAACGAA 1324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915152574336