Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900008665.1_202016-07-08] 5,182 sequences; 26,789,479 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1956 271 1e-70 seq4965 100 5e-19 seq4942 100 5e-19 seq2607 100 5e-19 >seq1956 Length=687 Score = 271 bits (300), Expect = 1e-70 Identities = 179/198 (90%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||||| ||| | || ||||||||||||||||| |||| Sbjct 269 ACCTGTTATTGCCTCAAACTTCCATCAGCTAAACGCTGATAGTCCCTCTAAGAAGTCAGC 210 Query 121 CACCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 | ||| ||| || || ||| ||||||||||||||||||||||||||||||||||||||| Sbjct 209 CGCCAGCCAAAGCCGGCGGGACTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 150 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 ||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||| Sbjct 149 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCAACCACAAGATCAAGA 90 Query 241 AAGAGCTATCAATCTGTC 258 |||||||||||||||||| Sbjct 89 AAGAGCTATCAATCTGTC 72 >seq4965 Length=206 Score = 100 bits (110), Expect = 5e-19 Identities = 58/60 (97%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 20 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 79 >seq4942 Length=207 Score = 100 bits (110), Expect = 5e-19 Identities = 58/60 (97%), Gaps = 0/60 (0%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 188 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 129 >seq2607 Length=453 Score = 100 bits (110), Expect = 5e-19 Identities = 58/60 (97%), Gaps = 0/60 (0%) Strand=Plus/Plus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 391 TACTCGCTGGCTCTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796760000142