Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900009975.1_202016-07-08] 5,993 sequences; 26,287,464 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq261 104 6e-20 seq1689 82.4 2e-13 >seq261 Length=27385 Score = 104 bits (114), Expect = 6e-20 Identities = 151/211 (72%), Gaps = 12/211 (6%) Strand=Plus/Plus Query 209 ACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCA 268 ||||||||| |||||||||| | ||| | || ||||| |||||| || | Sbjct 18287 ACCCATTATGCAAAAGGTACAATATTACCAATTAA----GGCTCTATCTGCTTATAAGAT 18342 Query 269 TACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGG 328 | | |||||| ||| |||||| | || || | ||||| |||||||||||||| Sbjct 18343 TGCTAATTCAGGCTCTGTTTCAC--CAGTCATCGACTTGCTTTTAACCTTTCCCTCACGG 18400 Query 329 TACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATT 388 |||| |||||||||| | | | || |||||||||||||||||| |||||||||| Sbjct 18401 TACTC-TTCACTATCGCTAAACATATCATACTTAGCCTTGGAGGATGGTACCCCCATATT 18459 Query 389 CAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 |||||| | || || |||||| ||||| Sbjct 18460 CAGACAGACTTACT-----TCCGTCTTACTC 18485 >seq1689 Length=943 Score = 82.4 bits (90), Expect = 2e-13 Identities = 80/102 (78%), Gaps = 6/102 (6%) Strand=Plus/Plus Query 318 TTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGT 377 ||||||||||||||| |||||||||| | | | || |||||||||||||||||| Sbjct 198 TTCCCTCACGGTACTC-TTCACTATCGCTAAACATATCATACTTAGCCTTGGAGGATGGT 256 Query 378 CCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 |||||||||||||||| | || || |||||| ||||| Sbjct 257 ACCCCCATATTCAGACAGACTTACT-----TCCGTCTTACTC 293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241525590912