Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900009975.1_202016-07-08] 5,993 sequences; 26,287,464 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1066 609 7e-172 >seq1066 Length=2279 Score = 609 bits (674), Expect = 7e-172 Identities = 446/510 (87%), Gaps = 10/510 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||| |||||||| |||||||||| || ||||||||||||||| || Sbjct 1326 GTACTCATTCCAATTGCAAGACCCGTAAGAGCCCTGCATTGTTATTTATTGTCACTATCT 1267 Query 61 CCCC---GTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCT-TCCTTGGATGTGGTAGC 116 | | |||| | | || ||||||||||||||||||| | ||||| || || || Sbjct 1266 CGGCAAAGTGTTGCCAGGGGATAATTTGCGCGCCTGCTGCGTGTCCTTAGACCTGAGGGC 1207 Query 117 CGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCAT 176 |||||||||||| | ||||||||||||||||||| |||||||||||||||| ||||| Sbjct 1206 CGTTTCTCAGGCCCTCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTCATCACCAT 1147 Query 177 GGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCC 236 |||||||| ||||||||||||||||||||||||||||||| ||||||||||| ||||||| Sbjct 1146 GGTAGGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGCC 1087 Query 237 GGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGT 296 ||| ||||||||||||||||| |||||| |||| ||||||| ||| ||||| | | | Sbjct 1086 GGCGCAAGGCCATGCGATTCGAGCAGTTATCATGATTCACCAAAGAG-ACCGAA-GCCAT 1029 Query 297 TGGTTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTT-AGCATGTATTAG 354 ||||||| |||||||||||||| ||||||| ||||||||| ||||| |||||||||||| Sbjct 1028 TGGTTTTGGATCTAATAAATACATCCCTTCCAGAAGTCGGGATTTTTCAGCATGTATTAG 969 Query 355 CTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATT 414 ||||||||||||||| ||||||||||||||||||||| ||||||||||| ||| |||||| Sbjct 968 CTCTAGAATTACCACAGTTATCCATGTAGTAAGGTACCATCAAATAAACTATAGCTGATT 909 Query 415 TAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAA 474 ||||||||||||||||||||||| || | |||||||| ||||||||||||||||||||| Sbjct 908 TAATGAGCCATTCGCAGTTTCACCGTTT--ATTGCTTAAACTTAGACATGCATGGCTTAA 851 Query 475 TCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||||||| Sbjct 850 TCTTTGAGACAAGCATATGACTACTGGCAG 821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510309481728