Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq1095 178 3e-42 >seq1095 Length=2939 Score = 178 bits (196), Expect = 3e-42 Identities = 238/325 (73%), Gaps = 7/325 (2%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||| ||| |||||| ||| | |||||||| ||| ||||| || | | Sbjct 547 AGGGGAGTGAAAGAGATCCTGAAACCGTGTGCCTACAAATAGTCAGAGCCC-GTTAACGG 605 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCG-TCACCAGCGAGGTTAAG 129 |||| ||||||||||||| | ||||| || ||||||| || || | ||||||||||| Sbjct 606 GTGATGGCGTGCCTTTTGTAGAATGAACCGGCGAGTTA--CGATCCCGTGCGAGGTTAAG 663 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 || || || ||||| || ||||||||| || || |||||| ||| |||| Sbjct 664 --CTGAAGAGGCGG-AGCCGCAGCGAAAGCGAGTCTGAATAGGGCGTTTAGTACGTGGTC 720 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 ||||| ||||||| |||||||||||| | |||| |||||| |||||| | ||| Sbjct 721 GTAGACCCGAAACCAGGTGATCTACCCATGTCCAGGGTGAAGTTCAGGTAACACTGAATG 780 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| ||||||| |||||||||||| |||||| | |||||| || |||| Sbjct 781 GAGGCCCGAACCCACGCACGTTGAAAAGTGCGGGGATGAGGTGTGGGTAGCGGAGAAATT 840 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 |||||| ||| ||| |||||| || Sbjct 841 CCAATCGAACCTGGAGATAGCTGGT 865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972747031040