Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq1587 322 1e-85 >seq1587 Length=1365 Score = 322 bits (356), Expect = 1e-85 Identities = 311/397 (78%), Gaps = 2/397 (1%) Strand=Plus/Minus Query 15 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTAATCG 74 |||| |||||||||||||||||||||||||||||||||||||| |||||||||| || Sbjct 1061 AAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGTGGCAAGCGTTATCCG 1002 Query 75 GAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGTGAAATCCCCGGG 134 |||||| ||||||||||||| ||||||| |||| |||| | | ||||||| ||| || Sbjct 1001 GAATTATTGGGCGTAAAGCGCGCGCAGGTGGTTTCTTAAGTCTGATGTGAAAGCCCACGG 942 Query 135 CTTAACCTGGGAATTGCATTTGTGACTGCACGACTAGAGTGTGTCAGAGGGGGGTGGAAT 194 || |||| ||| |||| | |||| |||| ||||| ||||| ||||||| Sbjct 941 CTCAACCGTGGAGGGTCATTGGAAACTGGGAGACTTGAGTGCAGAAGAGGAAAGTGGAAT 882 Query 195 TCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATGGCGAAGGCAGCCC 254 |||| ||||||| |||||||||||||| || ||||||||||||| |||||||||| | Sbjct 881 TCCATGTGTAGCGGTGAAATGCGTAGAGATATGGAGGAACACCAGTGGCGAAGGCGACTT 822 Query 255 CCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 314 |||| | |||||| || | || |||||||||||||||||||||||||||||||||| Sbjct 821 TCTGGTCTGTAACTGACACTGAGGCGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 762 Query 315 TGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTT-GGGGATTTACTTCC-TTGGTAA 372 |||||||||||||| |||||||| ||| |||| | || ||| | || || || Sbjct 761 TGGTAGTCCACGCCGTAAACGATGAGTGCTAAGTGTTAGAGGGTTTCCGCCCTTTAGTGC 702 Query 373 CGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATAC 409 | || |||||| | ||| ||||||||||| ||| Sbjct 701 TGAAGTTAACGCATTAAGCACTCCGCCTGGGGAGTAC 665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289529781280