Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= AAMG01000567.1 Length=197 Score E Sequences producing significant alignments: (Bits) Value seq1095 116 4e-24 >seq1095 Length=2939 Score = 116 bits (128), Expect = 4e-24 Identities = 131/175 (75%), Gaps = 3/175 (2%) Strand=Plus/Plus Query 22 CGCAAACGGACACACGTAGTCGGGTTGAATATACTAAGGCGCTTGAGTGAATCACGGTTA 81 ||||||| |||||| |||| || | || || |||||| | ||| ||| ||||| Sbjct 1664 CGCAAACCGACACAGGTAGGCGAGGAGAGAATCCTAAGGTGTGCGAGAGAACTCTGGTTA 1723 Query 82 AGGAACTAGGCAAACTGACCCTGTAACTTCGGGATAAAGGGTCCCTACCCAGAAATGGGA 141 ||||||| |||||| |||||| |||||||||||| || |||| | | | || || | Sbjct 1724 AGGAACTCGGCAAAATGACCCCGTAACTTCGGGAGAAGGGGTGCTTTC---TTAACGGAA 1780 Query 142 GGGCGCAGAGAATAGGTCCAGGCAACTGTTTAACAAAAACACAGGGCTGTGCCAA 196 | ||||| ||||||| ||| || |||||||| ||||||||||| || ||| || Sbjct 1781 AGCCGCAGTGAATAGGCCCAAGCGACTGTTTAGCAAAAACACAGCTCTCTGCGAA 1835 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531171980030