Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1095 322 1e-85 >seq1095 Length=2939 Score = 322 bits (356), Expect = 1e-85 Identities = 320/416 (77%), Gaps = 24/416 (6%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || |||||||||||||| | | |||||||| ||||||| ||| ||||||| Sbjct 2080 CGCGGGTAACCTGCATCTTCACAGGTACTATAATTTCACCGAGTCTCTGGTTGAGACAGT 2021 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 ||| |||||||| || ||||||| |||||||||||||||||||||||||||||||||| Sbjct 2020 GCCCAAATCGTTACACCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1961 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||| |||||||| | |||||||||| | Sbjct 1960 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAGTTCAGAGCTTCGCTTAC 1901 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 ||||||||| |||||||||| |||||||||||| ||||| |||||||| || ||| Sbjct 1900 GCTAACCCCTCTCCTTAACCTTCCAGCACCGGGCAGGTGTCACCCCCTATACTTCGCCTT 1841 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 || || |||||| ||||||||||| ||||||||||| ||||| | || | Sbjct 1840 ACGGCTTCGCAGAGAGCTGTGTTTTTGCTAAACAGTCGCTTGGGCCTATTCACT----GC 1785 Query 301 GGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACG 360 ||| | ||| || ||| |||| |||||||||||||||||| Sbjct 1784 GGCTTTCCGTTA---AGAAAG-----CACC------------CCTTCTCCCGAAGTTACG 1745 Query 361 GTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCT 416 | | | ||||||| |||||||| || |||||||||| | |||| | ||||||| Sbjct 1744 GGGTCATTTTGCCGAGTTCCTTAACCAGAGTTCTCTCGCACACCTTAGGATTCTCT 1689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260731349440