Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq1417 461 1e-127 seq1095 87.8 3e-15 >seq1417 Length=1715 Score = 461 bits (510), Expect = 1e-127 Identities = 258/260 (99%), Gaps = 0/260 (0%) Strand=Plus/Minus Query 36 AGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 95 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 773 AGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGT 714 Query 96 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 155 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 713 GGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG 654 Query 156 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 215 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 653 AAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTG 594 Query 216 GTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACA 275 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 593 GTAACTTTTCTGGCACCTCTAGCCTCAAATTCCGAGGGACTAAAGGATCGATAGGCCACA 534 Query 276 CTTTCATGGTTTGTATTCAC 295 |||||||||||||||||||| Sbjct 533 CTTTCATGGTTTGTATTCAC 514 >seq1095 Length=2939 Score = 87.8 bits (96), Expect = 3e-15 Identities = 125/175 (71%), Gaps = 6/175 (3%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| |||| ||| |||||||||| ||| || ||| |||| ||||| ||||| Sbjct 2635 CTGTCTCACGACGTTCTGAACCCAGCTCGCGTACCGCTTTAATGGGCGAACAGCCCAACC 2576 Query 113 CTT---ACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 ||| ||||| | | || | | ||| || ||||||||||||| | |||| | Sbjct 2575 CTTGGGACCGACTACAGCCCCAGGATGC---GATGAGCCGACATCGAGGTGCCAAACCTC 2519 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTT 224 ||||| | || || ||||| | | ||||| |||||||| | |||| ||||| Sbjct 2518 CCCGTCGATGTGGACTCTTGGGGGAGATAAGCCTGTTATCCCCGGGGTAGCTTTT 2464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854353477920