Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq1587 205 2e-50 >seq1587 Length=1365 Score = 205 bits (226), Expect = 2e-50 Identities = 165/197 (84%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 2 TTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCA 61 ||||| | ||||| ||||| | ||| |||||||| ||| || |||| |||||| ||| Sbjct 1128 TTTACGACCCGAAAGCCTTCAT-CACTCACGCGGCGTTG-CTCCGTCAGACTTTCGTCCA 1185 Query 62 TTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGT 121 ||| || |||||| ||||||||||||||||||||||||| |||||||||||| ||||| Sbjct 1186 TTGCGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGT 1245 Query 122 GTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCAC 181 ||| | ||||| |||||||| | | |||| ||||| ||||||||||||| ||||||||| Sbjct 1246 GTGGCCGATCACCCTCTCAGGTCGGCTACGCATCGTTGCCTTGGTGAGCCGTTACCTCAC 1305 Query 182 CAACTAGCTAATCCGAC 198 |||||||||||| |||| Sbjct 1306 CAACTAGCTAATGCGAC 1322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071941629600