Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq1095 369 1e-99 >seq1095 Length=2939 Score = 369 bits (408), Expect = 1e-99 Identities = 419/554 (76%), Gaps = 25/554 (5%) Strand=Plus/Minus Query 53 GGCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTG-GGCCCCCTAGACCATCCAGTGCT 111 ||||||||||||||| ||| |||||||| | || || ||||||| ||| ||||||| Sbjct 978 GGCATTCGGAGTTTGACTGAATTCGGTAATCCGATGAGGACCCCTAGTCCAATCAGTGCT 919 Query 112 CTACCTCCGGGAAGAA----ACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAACCA 167 |||||||| |||| |||| | ||| |||||| |||||||||||||||| Sbjct 918 CTACCTCC---AAGACTCTTACACTTAAGGCTAGCCCTAAAGCTATTTCGGGGAGAACCA 862 Query 168 GCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTTTCA 227 |||||| | | ||| |||||| |||| || ||| ||||| |||||||| || |||||| Sbjct 861 GCTATCTCCAGGTTCGATTGGAATTTCTCCGCTACCCACACCTCATCCCCGCACTTTTCA 802 Query 228 ACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGATAG 287 || | |||||||||| |||||| | || ||||| | ||||| |||| ||||| ||| Sbjct 801 ACGTGCGTGGGTTCGGGCCTCCATTCAGTGTTACCTGAACTTCACCCTGGACATGGGTAG 742 Query 288 ATCACTTCGCTTCGGGTCTT-GATCGTGCCACTCATACGCCCTATTCGGACTCGCTTTCG 346 ||||| | | ||||||||| || | | ||| | ||||||||||| |||||||||||| Sbjct 741 ATCACCTGGTTTCGGGTCTACGACCACGT-ACTAA-ACGCCCTATTCAGACTCGCTTTCG 684 Query 347 CTACGGCTACCCCACA-CGGGTTAACCTCGCGACACAACGCAAACTCGCAGGCTCATTCT 405 || ||||| | || | | | |||||||||| | || || ||||| || ||||||| Sbjct 683 CTGCGGCTCCGCCTCTTCAGCTTAACCTCGCACGGGATCGTAA-CTCGCCGGTTCATTCT 625 Query 406 TCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGC 465 ||||||||||||| ||||| | || | || |||| ||| |||||||| Sbjct 624 ACAAAAGGCACGCCATCACCCGTTAAC-----GG-------GCTCTGACTATTTGTAGGC 577 Query 466 ACATGGTTTCAGGTACTATTTCACTCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGG 525 ||| ||||||||| || ||||||||||| | ||||| ||||||||||||||||||||| Sbjct 576 ACACGGTTTCAGGATCTCTTTCACTCCCCTTCCGGGGTGCTTTTCACCTTTCCCTCACGG 517 Query 526 TACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATT 585 |||| || | |||||| |||| | ||||||||||| ||| | |||||| ||||||| Sbjct 516 TACTGGTTCACTATCGATCACTAGGGAGTATTTAGCCTTGGGAGATGGTCCTCCCAGATT 457 Query 586 CACACGAAATTTCA 599 | ||| ||||||| Sbjct 456 CCGACGGAATTTCA 443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817501031680