Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq1095 264 3e-68 seq1919 82.4 2e-13 >seq1095 Length=2939 Score = 264 bits (292), Expect = 3e-68 Identities = 300/391 (77%), Gaps = 10/391 (3%) Strand=Plus/Minus Query 30 TTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCC 89 ||||||||| || ||||||| |||||| | ||| |||||| | ||| || |||| | Sbjct 807 TTTTCAACGTGCGTGGGTTCGGGCCTCCATTCAGT-GTTACCTGAACTT-CACCCTGGAC 750 Query 90 ATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGAC 149 || || |||||| || ||||| |||||||| || | |||| |||||||| | |||| Sbjct 749 ATGGG-TAGATCACCTGGTTT-CGGGTCTACGACCACGT-ACTAAACGCCCTATTCAGAC 693 Query 150 TCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTCGCTG 208 ||||||| |||| || |||| ||| ||| | | | | | || || ||| |||| | Sbjct 692 TCGCTTT-CGCTGCGGCTCCGCCTCTTCAGCTTAACCTCGCACGGGATCGTAACTCGCCG 634 Query 209 ACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTACGCA 268 |||| ||||||||| |||| |||||| || | ||||| ||| ||||| ||| Sbjct 633 GTTCATTCTACAAAAGGCACGCCATCACCCGTTAACG--GGCTCTGACTATTTGTAGGCA 576 Query 269 TACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGG 328 ||||||||||||||| |||||||||||| |||||||| |||||| |||||||||||||| Sbjct 575 CACGGTTTCAGGATCTCTTTCACTCCCCT-TCCGGGGTGCTTTTCACCTTTCCCTCACGG 517 Query 329 TACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATT 388 |||| ||||||||||| ||| | | ||||||||||||||| |||||||| |||| ||| Sbjct 516 TACTGGTTCACTATCGATCACTAGGGAGTATTTAGCCTTGGGAGATGGTCCTCCCAGATT 457 Query 389 CAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 | ||| | |||| |||| |||| | ||||| Sbjct 456 CCGACGGAATTTCACGTGTTCCGCCGTACTC 426 >seq1919 Length=942 Score = 82.4 bits (90), Expect = 2e-13 Identities = 80/102 (78%), Gaps = 6/102 (6%) Strand=Plus/Minus Query 318 TTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGT 377 ||||||||||||||| |||||||||| | | | || |||||||||||||||||| Sbjct 746 TTCCCTCACGGTACTC-TTCACTATCGCTAAACATATCATACTTAGCCTTGGAGGATGGT 688 Query 378 CCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 |||||||||||||||| | || || |||||| ||||| Sbjct 687 ACCCCCATATTCAGACAGACTTACT-----TCCGTCTTACTC 651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241532394880