Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq1587 293 4e-77 >seq1587 Length=1365 Score = 293 bits (324), Expect = 4e-77 Identities = 234/279 (84%), Gaps = 2/279 (1%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||||||||||| ||||||||| | |||| || |||||||||||||||||| Sbjct 784 CCCACGCTTTCGCGCCTCAGTGTCAGTTACAGACCAGAAAGTCGCCTTCGCCACTGGTGT 843 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| ||| ||||||||||||||||||||||| |||||||| || ||||| | |||| Sbjct 844 TCCTCCATATCTCTACGCATTTCACCGCTACACATGGAATTCCACTTTCCTCTTCTGCAC 903 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCT-ATGGGTTGAGCCCATAGTTTTCACATCTGAC 179 ||||| ||||||| |||| | || ||||||||| | ||||||||| ||| Sbjct 904 TCAAGTCTCCCAGTTTCCAATG-ACCCTCCACGGTTGAGCCGTGGGCTTTCACATCAGAC 962 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 || || ||| | ||| |||||| |||||||| ||||||||||||||||||||||| Sbjct 963 TTAAGAAACCACCTGCGCGCGCTTTACGCCCAATAATTCCGGATAACGCTTGCCACCTAC 1022 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 278 ||||||||||||||||||||||||||||||||||||||| Sbjct 1023 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTT 1061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828756282095