Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 3e-15 >seq1 Length=1156483 Score = 87.8 bits (96), Expect = 3e-15 Identities = 103/138 (75%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 90 AGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTT 149 || || || | ||| || |||| | || | ||| || ||| || |||||| ||||| Sbjct 601159 AGTACAGCCATGAATGCCTCTT-GCGGTACTTCTACAGAGCCAACAGACTTCATACGTTT 601217 Query 150 TTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCA 209 |||||| | |||||||| ||||| || || |||||||| | |||||||||||| || Sbjct 601218 TTTACCTTCTTTTTGCTTATCAAGAAGTTTACGCTTACGAGAAATGTCACCGCCGTAACA 601277 Query 210 TTTGGCCAGTACGTTCTT 227 ||| || |||||||| || Sbjct 601278 TTTTGCAAGTACGTTTTT 601295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 838354349120