Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq1587 206 7e-51 seq4223 95.1 3e-17 >seq1587 Length=1365 Score = 206 bits (228), Expect = 7e-51 Identities = 182/226 (81%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64 ||||| ||||||| |||||| ||| |||||||| | ||| | |||| ||| || ||||| Sbjct 1128 TTTACGACCCGAAAGCCTTCATCACTCACGCGGCGTTGCTCCGTCAGACTTTCGTCCATT 1187 Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124 | | || |||||| ||||||||||||||||||||||||| |||||||||||| ||||||| Sbjct 1188 GCGGAAGATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 1247 Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184 ||| | ||| |||||||| | |||| | ||||| |||| |||| ||| ||||| | ||| Sbjct 1248 GGCCGATCACCCTCTCAGGTCGGCTACGCATCGTTGCCTTGGTGAGCCGTTACCTCACCA 1307 Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAG 230 |||||||||| | | |||| ||||| ||||| || |||||| Sbjct 1308 ACTAGCTAATGCGACGCGGGTCCATCCATAAGTGACAG--CCGAAG 1351 >seq4223 Length=247 Score = 95.1 bits (104), Expect = 3e-17 Identities = 123/164 (75%), Gaps = 7/164 (4%) Strand=Plus/Plus Query 254 GTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGCAGTTT-CCCA 312 ||||| ||||||||||| | |||||| | |||||||| || ||||| || |||| Sbjct 20 GTTATCCGGTATTAGCCCCGGTTTCCCGGAGTTATCCCAGTCTTATGGGCAGGTTACCCA 79 Query 313 GACATTACTCACCCGTCCGCCACT--CGTCAGCGAAGCAGCAAGCTGCTTCCTGTTACCG 370 ||||||||||||||||| || | ||| ||| |||||||| ||| | || Sbjct 80 CGTGTTACTCACCCGTCCGCCGCTAACTTCAT--AAG-AGCAAGCT-CTTAATCCATTCG 135 Query 371 TTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414 ||||||||||||| |||||| |||||||||||||| ||||| Sbjct 136 CTCGACTTGCATGTATTAGGCACGCCGCCAGCGTTCATCCTGAG 179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222333440320