Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Microbotryum_20lychnidis-
dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq1587 387 4e-105
>seq1587
Length=1365
Score = 387 bits (428), Expect = 4e-105
Identities = 309/376 (82%), Gaps = 27/376 (7%)
Strand=Plus/Minus
Query 151 GGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCA 210
|||| |||||||||| |||||||||||||| ||||||||||| |||||||| |||||
Sbjct 1334 GGATGGACCCGCGTCGCATTAGCTAGTTGGTGAGGTAACGGCTCACCAAGGCAACGATGC 1275
Query 211 GTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTAC 270
|||||||||||||||||||||||||||||| ||| |||||||||||| ||| ||||||||
Sbjct 1274 GTAGCCGACCTGAGAGGGTGATCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTAC 1215
Query 271 GGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGT 330
||||||||||||| |||||| || | |||||| | |||| |||| | |||||||||||||
Sbjct 1214 GGGAGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGACGGAGCAACGCCGCGT 1155
Query 331 GAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAG--------------- 375
||| ||||||||| ||||||||||||| |||||| | | |||||
Sbjct 1154 GAGTGATGAAGGCTTTCGGGTCGTAAAACTCTGTTGTTAGGGAAGAACAAGTGCTAGTTG 1095
Query 376 -ATAA----------TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAG 424
|||| ||||||||| | | || ||||| |||||||||||||||||||||
Sbjct 1094 AATAAGCTGGCACCTTGACGGTACCTAACCAGAAAGCCACGGCTAACTACGTGCCAGCAG 1035
Query 425 CCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTA 484
||||||||||||||||| ||| ||||||||||||||||| | |||||||||| | ||| |
Sbjct 1034 CCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGAATTA-TTGGGCGTAAAGCGCGCGCA 976
Query 485 GGTGGTTTCTTAAGTC 500
||||||||||||||||
Sbjct 975 GGTGGTTTCTTAAGTC 960
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1497518455680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |