Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Microbotryum_20lychnidis- dioicae_20[genbank_20GCA_5F900010185.1_202016-07-09] 5,445 sequences; 33,462,554 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq1587 387 4e-105 >seq1587 Length=1365 Score = 387 bits (428), Expect = 4e-105 Identities = 309/376 (82%), Gaps = 27/376 (7%) Strand=Plus/Minus Query 151 GGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCA 210 |||| |||||||||| |||||||||||||| ||||||||||| |||||||| ||||| Sbjct 1334 GGATGGACCCGCGTCGCATTAGCTAGTTGGTGAGGTAACGGCTCACCAAGGCAACGATGC 1275 Query 211 GTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTAC 270 |||||||||||||||||||||||||||||| ||| |||||||||||| ||| |||||||| Sbjct 1274 GTAGCCGACCTGAGAGGGTGATCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTAC 1215 Query 271 GGGAGGCAGCAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGT 330 ||||||||||||| |||||| || | |||||| | |||| |||| | ||||||||||||| Sbjct 1214 GGGAGGCAGCAGTAGGGAATCTTCCGCAATGGACGAAAGTCTGACGGAGCAACGCCGCGT 1155 Query 331 GAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAG--------------- 375 ||| ||||||||| ||||||||||||| |||||| | | ||||| Sbjct 1154 GAGTGATGAAGGCTTTCGGGTCGTAAAACTCTGTTGTTAGGGAAGAACAAGTGCTAGTTG 1095 Query 376 -ATAA----------TGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAG 424 |||| ||||||||| | | || ||||| ||||||||||||||||||||| Sbjct 1094 AATAAGCTGGCACCTTGACGGTACCTAACCAGAAAGCCACGGCTAACTACGTGCCAGCAG 1035 Query 425 CCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTA 484 ||||||||||||||||| ||| ||||||||||||||||| | |||||||||| | ||| | Sbjct 1034 CCGCGGTAATACGTAGGTGGCAAGCGTTATCCGGAATTA-TTGGGCGTAAAGCGCGCGCA 976 Query 485 GGTGGTTTCTTAAGTC 500 |||||||||||||||| Sbjct 975 GGTGGTTTCTTAAGTC 960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1497518455680